Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02317 ATGCCATCATCATCTCTCtctcatctttctctctctttcctcCCAAAACTACCACACACTACTCTCCCTCAAAAATCTTATCCACTTCACCATCTCTCAATaaaatcatcaatcaacaacaaaacaccacaaaaaatcacaaaaacaagttCATGGGTTAGTCCAGATTGGCTTACTTCACTATCCAAGTCTTTAACAACAACAGGAAAAGATGATGATTCTGGTATTCCTATAGCAAGTGCTAAACTTGATGATGTTTCTGATCTTTTAGGTGGTGCtctttttcttcctttgttTAAATGGATGAATGAGTATGGTCCTATTTATCGTTTAGCTGCTGGTCCTagaaattttgttgttgttagtgATCCTGCTATTGCTAAACATGTGCTTAAGAATTATGGTAAATATGGTAAAGGGCTTGTTGCTGAAGTTTCTGAGTTTCTTTTTGGTTCTGGTTTTGCTATTGCTGAAGGGTCTCTTTGGACGGCAAGACGCAGAGCTGTGGTTCCGTCTCTTCACAAACGGTACTTGTCTATTATGGTGGATAGGGTTTTTTGTAGATGTGCTGAGAGATTAGTAGAGAAGCTGCAATCTGATGCAATTAATGGAACTCCTGTTAACATGGAGGACAAGTTTTCTCAATTAACCCTTGATGTTATCGGTTTGTCTGTATTCAACTACAACTTTGATGCACTAAATTCAGACAGTCCTGTTATTGAAGCTGTTTACACTGCACTAAAAGAGGCGGAAGCTCGCTCAACCGATCTATTGCCGTATTGGAAGATTAATTTTCTTTGTAAGATAATCCCAAGACAAATAAAGGCTGAAAACGCTGTTAGTGTTATAAGGAAAACAGTAGAAGATCTTATTGCAAAATGCAAAGAGATTGTAGAGTCTGAGGGTGAAAGAATTGATGCTGATGAATATGTCAATGACGCTGATCCTAGTATTCTTCGATTTTTGCTTGCCAGCAGAGAAGAGGTTTCAAGTGTGCAATTAAGGGATGATCTTTTGTCAATGTTAGTTGCTGGTCATGAGACCACCGGTTCAGTGCTGACTTGGACACTTTATCTTCTAAGTAAGGATACTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAGAGTTTTACAGGGAAGGCGCCCTTCGTATGAAGATATTAAAGATCTTAAGTTCTTGAATCGTTGCATTATCGAGTCACTCCGACTTTATCCACATCCTCCTGTATTGATAAGAAGATCTCAAGTTCCTGATGAACTTCCGGGCGATTACAAAATCAATGCTGGTCAAGATATTATGATTTCTGTGTACAACATACATCATTCTTCTAAGGTTTGGGATAGAGCCGAAGAGTTTTTGCCAGATAGATTTGATTTGAATGGTCCAGTACCAAATGAAACAAATACAGATTTCAGATTCATTCCATTTAGCGGAGGGCCACGAAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTACCGTAGCTCTTGCAGTCTTTCTACAGCACATGAACTTTGAGCTGGTCCCTGATCAGAATATCAGCATGACTACTGGTGCAACAATACATACCACAAATGGCTTGTACATGAAACTGAGCCAGCGGTTGAAATAG 1617 0.3704 MPSSSLSHLSLSFLPKLPHTTLPQKSYPLHHLSIKSSINNKTPQKITKTSSWVSPDWLTSLSKSLTTTGKDDDSGIPIASAKLDDVSDLLGGALFLPLFKWMNEYGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYGKGLVAEVSEFLFGSGFAIAEGSLWTARRRAVVPSLHKRYLSIMVDRVFCRCAERLVEKLQSDAINGTPVNMEDKFSQLTLDVIGLSVFNYNFDALNSDSPVIEAVYTALKEAEARSTDLLPYWKINFLCKIIPRQIKAENAVSVIRKTVEDLIAKCKEIVESEGERIDADEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDTSSLAKAQEEVDRVLQGRRPSYEDIKDLKFLNRCIIESLRLYPHPPVLIRRSQVPDELPGDYKINAGQDIMISVYNIHHSSKVWDRAEEFLPDRFDLNGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEATVALAVFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSQRLK 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02317 538 Gene3D Cytochrome P450 77 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 Pfam Cytochrome P450 98 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Tsu01g02317 538 PANTHER CYTOCHROME P450 FAMILY 4 114 536 - -
Tsu01g02317 538 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 114 536 - -
Tsu01g02317 538 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02317 538 SUPERFAMILY Cytochrome P450 90 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02317 Tsu-Chr1 24705469 24710671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02317 28 536 Cytochrome P450 AT3G53130 80.469 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02317 K09837 - gmx:100803324 897.116