Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02281 ATGGCTTCTTGCGACGACGATGACGATTTCTCAATCCTCCGTGACGATAACCACCACTCTCACCATCTTCACCAAACCTTCGCACCACATCAtcaccaccacaaccaccacaCTCACCATCATTTCTCCACCGCTTCAGTCCATTCCAAACCCGTTACCGACGACGACACCGACGATTACGGAAATCCATTCGATGACGACGCCGGAAGCGAGAAACGTAAGGATCGAGACGAGATCGGAGACGGAACGACGTCGTACGCGTATAATAAGAGAGCAAAACCTGTTTCTAGCGGTAGCGGTGGAGTAGGAGGAGTAGGAGCTGAGTATAGGAAGGATCGAGAAGAATGGAGTGATACAgcgattgtttgtttgttagaaGCTTATACTGAGAAGTTTACGCAGCTGAATCGGGGGAATCTGAGAGGAAGAGATTGGGAAGAGGTAGCGTCGGTGGTGAGTGAACGGTGTGAGAATCAATCGAAGAGTGTTGAACAGTGTAAGAACAAGgttgataatttgaagaaaaggTATAAGCTAGAGAGGCATAGAATGAACAATGGATGCATCTCTGCGAGTCATTGGCCTTGGTATAAGCAGATGGAACATATAGTAGGAAATTCTCTTCCTTCTAAGTTCGCCGACGACGATAAAGCCATTGTTCCTGCTTCCATTTCACCTAGGCAATCCAAGAGatatggAGTGGCAACGTCCAGCAGTGGAGGTCAAGTGAACAGCCTGAAGTCCAAAGCACTGCCGAACCTTAGATGGCGGAGAGTTGTTCTGAAAATTAGTGGATCTGCACTTACTGGATCAGATACCTGCAATATTGACCCTAAGGTGGCCATGTTAGTTTCAAGTGAAATTGCAATCGCTACCCGCCTTGGTGTGGAGGTAGCAATTGTTGTTGGAGGTCGTAATTTCTTCTGTGGAGATGCATGGGTGACTGCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACTGTGATGAACTCATTACTGCTCCAATCAGCTCTGGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTTCAATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGGCATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGTGCTGGCAATCCACTTTTCTCAACTGACATAGCTGCTGCTCTTCGAGCATCAGAGATTAATGCTCAGGCTGTCATCAAAGGTACTAATGTAGATGGTGTATACGACTGCAACTCCCGAGACAACAATTTCACTTTTGAGCACATATCTTTCAGGGAGCTAGTGTCTAGAGGTTTCGCCTCTATGGATGTGCAAGCCCTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTAGTTTTCAATCTATTGGCACCTGGGAACATCTCAAAAGCTTTGTGTGGAGAACAAGTTGGCACACTAATTGACCAAACTGGAGCTATAAGCTAA 1488 0.4429 MASCDDDDDFSILRDDNHHSHHLHQTFAPHHHHHNHHTHHHFSTASVHSKPVTDDDTDDYGNPFDDDAGSEKRKDRDEIGDGTTSYAYNKRAKPVSSGSGGVGGVGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVASVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMNNGCISASHWPWYKQMEHIVGNSLPSKFADDDKAIVPASISPRQSKRYGVATSSSGGQVNSLKSKALPNLRWRRVVLKISGSALTGSDTCNIDPKVAMLVSSEIAIATRLGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSLLLQSALEKMGVQTRVQTSVSMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPLFSTDIAAALRASEINAQAVIKGTNVDGVYDCNSRDNNFTFEHISFRELVSRGFASMDVQALTFCEENAIPVVVFNLLAPGNISKALCGEQVGTLIDQTGAIS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02281 495 CDD AAK_UMPK-PyrH-Ec 257 489 IPR015963 GO:0005737|GO:0006221|GO:0033862
Tsu01g02281 495 Pfam Myb/SANT-like DNA-binding domain 113 203 IPR044822 -
Tsu01g02281 495 Gene3D - 251 489 IPR036393 -
Tsu01g02281 495 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 66 495 IPR011817 GO:0006221|GO:0009041
Tsu01g02281 495 SUPERFAMILY Carbamate kinase-like 255 488 IPR036393 -
Tsu01g02281 495 MobiDBLite consensus disorder prediction 29 44 - -
Tsu01g02281 495 MobiDBLite consensus disorder prediction 29 105 - -
Tsu01g02281 495 Pfam Amino acid kinase family 258 468 IPR001048 -
Tsu01g02281 495 Hamap Uridylate kinase [pyrH]. 254 489 IPR015963 GO:0005737|GO:0006221|GO:0033862
Tsu01g02281 495 PANTHER URIDYLATE KINASE 66 495 - -
Tsu01g02281 495 Coils Coil 156 183 - -
Tsu01g02281 495 MobiDBLite consensus disorder prediction 65 81 - -
Tsu01g02281 495 Gene3D - 116 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02281 Tsu-Chr1 24143374 24147833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02281 94 207 Trihelix Transcription Factor Family AT3G14180 34.146 4.31e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tsu01g02281 AA_kinase 4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02281 - - gmx:100805176 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02281 01 24143374 24147833 Tsu01g02281 01 24143374 24147833 ECH