Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02278 ATGGCGTGCATGTGGCGCAAGAATGCCTGCAACGGCAAGAAACTTCCGTCAGACGTGCCGCGAGGCCACTTGGCTGTTATAGTAGGAGAGGCAAATAGGAGGTTTGTCATAAGAGCTGACTACCTGAATCATCCAGTGCTTCAACAACTGCTTGATCAAGCATGTGAAGGATATGGCTTCAACAAGAGTGGTCCTCTGGCTATACCTTGTGATGAGTTCCTATTTGAAGATATTCTTCATTCCCTTGGTGGAGGAACTCGCACACGTCGATCCTCTTCCCCTGTGCTTAAAAAAAAGCTAGATTTGTGCTTTTCCAAAGACTCTGTACCGTTACTTGAAATCTTTGACAGTAAAAGGAGCAACAACTACAAGCATTAA 378 0.4524 MACMWRKNACNGKKLPSDVPRGHLAVIVGEANRRFVIRADYLNHPVLQQLLDQACEGYGFNKSGPLAIPCDEFLFEDILHSLGGGTRTRRSSSPVLKKKLDLCFSKDSVPLLEIFDSKRSNNYKH 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02278 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 113 IPR003676 GO:0009733
Tsu01g02278 125 Pfam Auxin responsive protein 10 82 IPR003676 GO:0009733
Tsu01g02278 125 PANTHER AUXIN RESPONSIVE SAUR PROTEIN 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02278 Tsu-Chr1 24127873 24128495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02278 1 93 Calmodulin-binding Proteins AT4G34750 53.125 1.37e-25 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02278 K14488 - gmx:100777611 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02278 01 24127873 24128495 Tsu01g02278 01 24127873 24128495 ECH