Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02251 ATGGTTCATAATGATATGCTGAAGGTGGATGAGAAGTTTGATGATCTTGCTGATATTGTGCCAGGAATGGAGAAGAGTTACAATAGGGATTTATTCATCTTCCTCTATTTTCTCCCCATCATAGTTTCAGCAGTAACTTCATTTACAATACATCATGGCAAGTCACCATTTTATGGGAAATCCATACTTTACTTAAATAGGCATCAGACTGAAGAATGTAAAGATTGGAAAGGCTGGATGCAGAATGCAATCTGTTTGTCCATTGCTGCAAAAATTATCATTGTGCATGCTGTTGTGAGTGGTGGAATAGAAGATCCAAAAGGTTTGTTTGGAAGTAGAAAATATGAGGAGATTAAGCCACCTGAGGTGGAGGACTTTTGCTACATTACCGACAATACATTCTCGAAGGAAGAGGCTTCTGAGTTGGAGTTCCTTAGTTGTTACCCTGCTGAGCTCAGTTTGCTGGATTATTATTGTGTGAAGTTCTTGTCTTCTATGGTGGCTGCATCAGTTATATTTCTCGCACATTTTATGTTAAGCCCGAAGATTCATCCTTGgCCATCTATCACATATAAGCCACCTGAATTGAAGGAATGTGTTTTAACCATACATGACTTGTACTTCGGTAGGAAAGGGGGCTCTTTGCAAGCTGTGAGAGATAAATACAAACTGCACAAGTTCAAATGCGTGGCAACAACACCCTCTCCACCGGAGataccttttctttttttttga 735 0.3891 MVHNDMLKVDEKFDDLADIVPGMEKSYNRDLFIFLYFLPIIVSAVTSFTIHHGKSPFYGKSILYLNRHQTEECKDWKGWMQNAICLSIAAKIIIVHAVVSGGIEDPKGLFGSRKYEEIKPPEVEDFCYITDNTFSKEEASELEFLSCYPAELSLLDYYCVKFLSSMVAASVIFLAHFMLSPKIHPWPSITYKPPELKECVLTIHDLYFGRKGGSLQAVRDKYKLHKFKCVATTPSPPEIPFLFF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02251 244 PANTHER CYCLINS 141 244 IPR039361 -
Tsu01g02251 244 PANTHER CYCLINS 113 142 IPR039361 -
Tsu01g02251 244 SUPERFAMILY Cyclin-like 112 144 IPR036915 -
Tsu01g02251 244 SMART Cyclin_C_2 83 236 IPR004367 -
Tsu01g02251 244 SUPERFAMILY Cyclin-like 139 238 IPR036915 -
Tsu01g02251 244 Gene3D - 117 240 - -
Tsu01g02251 244 CDD CYCLIN 141 204 IPR013763 -
Tsu01g02251 244 Pfam Cyclin, C-terminal domain 136 235 IPR004367 -
Tsu01g02251 244 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 141 244 - -
Tsu01g02251 244 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 113 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02251 Tsu-Chr1 23789130 23791869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02251 109 244 Core Cell Cycle Gene Families AT1G47230 46.111 8.56e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02251 K06627 - gmx:100801988 191.815