Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02224 ATGAGTAGTAGTGTCTTTTGTAATTGTGAAATTTGCCAAGCTTATCTCACTTCAAGTTGGTCAAAAGATTTCAACAATCTTTGTGATTGGTATACTCATCTCCTAAAAAAATCACCAACAAAAACCATCCATATACATGTCCTAAAAAACACAATAACCGCAAATCATGAAAACGTTGAGTACATACTCAAAACAAAATTCGAAAACTACCCTAAAGGAAAACCCTTTTCAACAATCCTAGGTGATTTTCTTGGTCGTGGTATTTTCAACGTGGATGGTGATTTATGGAAATTTCAAAAGAAGATGGCAAGTTTAGAGCTCAACAAACACTCCATAAGATCTTTTGCTTTTGAAGTTGTCAATAATGAAATCCAACATCGTCTCATCCCTCTACTTCAAATCCAAAGCGACGTCGCTTTGGATTTACAAGATGTTTTCAAAAGATTCTcttttgattgtatttgtagATTTTCTTTTGGTTTAGACCCTAAGTGTTTAGAAAAATCCTTACCCATGTCGGATTTCGCTCTTTCTTTCGATTTAGCATCGAAATTATCCGCGGAAAGAGCTATGGTTGTGTCACCAATAATTTGGAAGATCAAAAGATTTTTCAACATAGGTAGTGAAAAAGAGCTCAAAAAAAGCATCACCATGATTAATATGTTAGCCAAAGTTGTTAtaaatcaaagaagaaaaatgggATTTTGTGATCACAAAGATTTGTTATCAAGATTCATGAGTACAACAATTCATGATGACATGTTTCTTAGAGACATAGTCATAAGTTTCTTATTGGCTGGTCGTGACACCGTGGCATCATCACTCACAAGTTTCTTTTGGTTATTAGCGAAAAATCCGGAAGTTGAGTCAGAAATTTTATTAGAGGCAGAAAGAGTAATTGGACCACTACatgatgaaaataataataataacttagGTGTGACAAATTTTGAACAACTTAGTAAATTGCATTATTTACATGCAGCAGCACATGAAAGTATGAGACTTTATCCACCAATTCAATTTGATTCAAAGTTTTGTTTGGTGGATGATGTTTTAATGGATGGTACAAAAGTGAAGAGTGGCACTAGGGTTACATATCATCCATATGCAATGGGTAGGTTGGAGGAATTGTGGGGTCAAGATTTTTTAGAGTTTAAGCCACAAAGATGGTTGAATAAAGATGGTATTTTTCAACCTCAAAATCAATTTAAGTACCCTATTTTTCAAGCTGGATTAAGGGTTTGTATTGGTAAAGAAATGGCTTTGATGGAACTTAAAAGTGTGGCAATTTGTTTACTTAGAAAGTTTCATATTGAATTGGGAGAGACAATGTTTCATCATGGTAACCATCCAAGATTCTCTCCTGGACTCACTGCCACTTTTGCTTTTGGTCTTCCTGTATTTGTTCATGAAAGAGGAACCAATTAA 1431 0.3319 MSSSVFCNCEICQAYLTSSWSKDFNNLCDWYTHLLKKSPTKTIHIHVLKNTITANHENVEYILKTKFENYPKGKPFSTILGDFLGRGIFNVDGDLWKFQKKMASLELNKHSIRSFAFEVVNNEIQHRLIPLLQIQSDVALDLQDVFKRFSFDCICRFSFGLDPKCLEKSLPMSDFALSFDLASKLSAERAMVVSPIIWKIKRFFNIGSEKELKKSITMINMLAKVVINQRRKMGFCDHKDLLSRFMSTTIHDDMFLRDIVISFLLAGRDTVASSLTSFFWLLAKNPEVESEILLEAERVIGPLHDENNNNNLGVTNFEQLSKLHYLHAAAHESMRLYPPIQFDSKFCLVDDVLMDGTKVKSGTRVTYHPYAMGRLEELWGQDFLEFKPQRWLNKDGIFQPQNQFKYPIFQAGLRVCIGKEMALMELKSVAICLLRKFHIELGETMFHHGNHPRFSPGLTATFAFGLPVFVHERGTN 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02224 476 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 Pfam Cytochrome P450 39 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 Gene3D Cytochrome P450 14 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02224 476 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 4 468 - -
Tsu01g02224 476 PANTHER CYTOCHROME P450 4 468 - -
Tsu01g02224 476 SUPERFAMILY Cytochrome P450 25 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02224 Tsu-Chr1 23326575 23328262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02224 6 473 Cytochrome P450 AT2G27690 58.491 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02224 K20624 - gmx:102662117 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02224 01 23326575 23328262 Tsu01g02224 01 23326575 23328262 ECH
Tsu07g03973 07 45796907 45803877 Tsu01g02224 01 23326575 23328262 PCT