Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02217 ATGGATTCACACAAGCAACTTTTCATCCTCTTATGTCTTTCCTTAGCACTTGTACTTCTCTCAGGACAAAAGGACTTGCAAGTTGAGGCCAGTCGCCACCATCTCCATCATCCTTCAATAGAATTGTTCATTTTCGGAGACTCGTATGTTGATACCGGAAACACCCCAAAAAGTAAACCGGGTTCGTGGAAAGAACCTTACGGCATAACTTTTCCCCGAAAACCCGCCGGAAGATTCTCCGATGGCAGAGTTTTATCGGACTTAATTGCCAAAACTCTGGGATTGAGATCACCTATTCCTTACAAATTCAGGAAAATAGTGTCTAAGCAATATTTAAAGTATGGGATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATTTACATCAGGCCCAAATATGACAGCTCAAATTGATTCTTTCAACCAGCTCATCCAAGAAAATGTTTACACTCCTACAGATCTCTCCAAATCTATTGCTTATGTGTCTGTCGCTGGAAATGACTACAATCATTATTTGGCCACAAATGGCTCTCTCCCGGGTTTCCCATCTTTCATTGCCTCAGTGGTTAAACAAACAACCACCAATTTGATTCATCTCCAAAGTATAGGATTTAAGAGAATTGTTGTAGGTGCTTTACAACCTCTTGGTTGTCTTCCTCTAACCACAGCTCAAGCATCATTCCAAAGTTGCAATAGTACATTTAATGATTTAGTAGCTCTCCATAACAACCTATTGAATCAATCTGTGACAAAGTTGAACCAAGAAACCAATGATCACAACACATTCACAATTCTAGACATTTTCGATGGTTTCGAGTCAGTATTGAATCACCCTTCAAGCCATAACATCAAGGAACGATTGAAGCCGTGCTGCTTCGGAGTAAGCAGTGAGTATAGTTGTGGAAGTGTAGATGAGAATAATGTTAAGAAATATTTGGTTTGTGAAAATCCTGAATCAACTTTCTTTTGGGATGGGTTGCATCCAACACAAGCAGGACAATTCGGGTTGCAGGTTGAGGCCGGTCACCATATCCATCAtcgttcaaaaaaattgtttgtttttggagACTCGTATGTCGATACCGGcaacaccaacaaaagtaaacccGGTTCATGGAAAGAACCATATGGCATAACTTCTCCCGGAAAACCTACCGGAAGATTCTCCGATGGTAGAGTTTTAACGGATTTCATTGCCAAGTATTTGAGATTGAGAACACCGATTACTCACAGATTATGGGATTATACAGTGCCTAAGCATTCTTTAAAGTATGGGATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATCTTCTTCAGGCCCAAATATGACAGCCCAAATTGATATTTTCAACCAACTCGTCCAAGAAAATGTGTACACTCTCTCAGATATCACTAATTCTATTGCTTATGTCTCAGTTGCTGGAAATGATTACAATTATTACTTGGCCACAAATGGATCTCTGCCGGGTTTCCCATCTTTCATTGCCTCAGTGGTTAACCAAACAACCATCAATTTGATTCATCTCCAAAGCTTAGGATTTAAGAGAATTGTTGTAGGTGCTTTACAACCCCTTGGTTGTCTTCCTCAAGCCACTGCTCAAACATCATTCCAAAGTTGCAATAGTACATTTAATGACCTAGTAACTCTCCACAACAATCTATTGAACCGATCTGTGACAAAGTTGAACCAAGAAATCAATGATCACAACACATTCACAATTCTAGATATTTTTGATGGTTTTAGGACAGTGTTGAATAATCCTTCAAGCCATAACATCAAGGAACGTTTGAAGCCATGTTGCTTTGGAGTAAGCAGTGAGTATAATTGTGGAAGTGTAGATGAGAATAATGTTAAGAAATATTTGGTTTGTGAAAATCCTGAATCAACTTTCTTTTGGGATGAGTTGCATCCAACACAAGCAGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAGAGGCCTTTACAAAATATTGTACTAG 1995 0.3835 MDSHKQLFILLCLSLALVLLSGQKDLQVEASRHHLHHPSIELFIFGDSYVDTGNTPKSKPGSWKEPYGITFPRKPAGRFSDGRVLSDLIAKTLGLRSPIPYKFRKIVSKQYLKYGMNFAYGGTGVFDTFTSGPNMTAQIDSFNQLIQENVYTPTDLSKSIAYVSVAGNDYNHYLATNGSLPGFPSFIASVVKQTTTNLIHLQSIGFKRIVVGALQPLGCLPLTTAQASFQSCNSTFNDLVALHNNLLNQSVTKLNQETNDHNTFTILDIFDGFESVLNHPSSHNIKERLKPCCFGVSSEYSCGSVDENNVKKYLVCENPESTFFWDGLHPTQAGQFGLQVEAGHHIHHRSKKLFVFGDSYVDTGNTNKSKPGSWKEPYGITSPGKPTGRFSDGRVLTDFIAKYLRLRTPITHRLWDYTVPKHSLKYGMNFAYGGTGVFDTSSSGPNMTAQIDIFNQLVQENVYTLSDITNSIAYVSVAGNDYNYYLATNGSLPGFPSFIASVVNQTTINLIHLQSLGFKRIVVGALQPLGCLPQATAQTSFQSCNSTFNDLVTLHNNLLNRSVTKLNQEINDHNTFTILDIFDGFRTVLNNPSSHNIKERLKPCCFGVSSEYNCGSVDENNVKKYLVCENPESTFFWDELHPTQAGWNAVYNELEKRGLYKILY 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02217 664 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 340 657 - -
Tsu01g02217 664 Pfam GDSL-like Lipase/Acylhydrolase 42 335 IPR001087 GO:0016788
Tsu01g02217 664 Pfam GDSL-like Lipase/Acylhydrolase 353 652 IPR001087 GO:0016788
Tsu01g02217 664 SUPERFAMILY SGNH hydrolase 40 335 - -
Tsu01g02217 664 Gene3D SGNH hydrolase 343 657 IPR036514 -
Tsu01g02217 664 Gene3D SGNH hydrolase 34 339 IPR036514 -
Tsu01g02217 664 PANTHER OSJNBB0059K02.9 PROTEIN 340 657 - -
Tsu01g02217 664 SUPERFAMILY SGNH hydrolase 350 655 - -
Tsu01g02217 664 PANTHER OSJNBB0059K02.9 PROTEIN 1 335 - -
Tsu01g02217 664 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02217 Tsu-Chr1 23240859 23250335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02217 353 650 Pollen Coat Proteome AT1G75930 27.129 4.08e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02217 - - gmx:100789208 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02217 01 23240859 23250335 Tsu01g02217 01 23240859 23250335 ECH
Tsu07g04005 07 46121439 46125782 Tsu01g02217 01 23240859 23250335 PCT