Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02214 ATGTCGACATATAGTGAAGAAATGTTGCATCTTGATAGTGATATAGAAGGGGAAGAATTCACCAGTGGCGATGGCATTGATACTGATAGATATGAATTGGGGGAAAAGAATTGTGGCATTGGTACTGATAGAAATGAATTGGGGAAAGAGAATTGTAATGAGAAAAAATGCTTAAGTGAAATTACAGATGATGATATAAGAGCTATGGAATTTAGCACAGAGGAAGAAGCTATAGACTTTTATAAAGTGTATGCACATTCCCAAGGGTTTGCCATAAGGAAGAAAGATGTGAAACGTaatgatgagaatgaaattGTTTCACGTCGATTACTTTGCAATAAAGCGGGTAAgagtgagagaaaaaataagaagaatgaGGATAGACATAGGCCAACTATGCGAACTGGCTGTCTTGCAAGACTTCGAGTAGCTTATGATATCATTCGTAAGATTTGGAAAGTTACTATGTTTGAGCCCTCTCACAACCATGACTTAACTCCTGCACATTTTGTTCACTTGACTCCTAATTATCGAGGTCATGAAGATCTTGGATTTATCAAAAAGGACTTGTATAACTACACAGATCATCAAGGAAGGGTTAGAATTGAAGACGGGGATACTTTCATTACTTTGAGTTATTTTCAAGATATTAATAATGAGGAAAAAATGGTCATGTTCCGTAGAGGGGCACTTGTCGCTGCATTCAATAGGCTATGTGAGATTTCGTGTATGAGTGCCAATGATTATAAGGAAGCTTTGGAAGGGATTAATAGTTTGTGTGACAAGATGAACAAACGTCGTGAGGGAAATGTCAATGGAAATAATAAGGCTAATAAATCTGTTGTTGGTGACCCGTAG 858 0.3566 MSTYSEEMLHLDSDIEGEEFTSGDGIDTDRYELGEKNCGIGTDRNELGKENCNEKKCLSEITDDDIRAMEFSTEEEAIDFYKVYAHSQGFAIRKKDVKRNDENEIVSRRLLCNKAGKSERKNKKNEDRHRPTMRTGCLARLRVAYDIIRKIWKVTMFEPSHNHDLTPAHFVHLTPNYRGHEDLGFIKKDLYNYTDHQGRVRIEDGDTFITLSYFQDINNEEKMVMFRRGALVAAFNRLCEISCMSANDYKEALEGINSLCDKMNKRREGNVNGNNKANKSVVGDP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02214 285 Pfam FAR1 DNA-binding domain 79 166 IPR004330 -
Tsu01g02214 285 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 38 178 - -
Tsu01g02214 285 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 38 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02214 Tsu-Chr1 23221079 23223173 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu01g02214 FAR1 1.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02214 - K17604 ahf:112758792 124.79