LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu01g02195	ATGGATTCGACATTCACTTCATCTGGAATTGCAATTGGTGACATCCACTCGACTGAAGCATCTGGAATTGAACAATTGACTTCATCTGATAGTTCTCAGTGTTACTACCCTAGCAATAACAAATCATGGGAGTCTTTAGTCTTTCATTCTATTAAAGAGATTGAAGATTTTTATGGTAAGTATGCATATCAAACTGAATTCTTTATCAGGAGTATGTTGAAGTCGAAGAACAATTCACAGAATAAGAAATCGGATAAGGTACATTACGTTCATTATGTTTGTAACAAACAAGGTTTCAAGAGGGGAAGTTTGCTTAATCCTAAGAACAAGCCAAGATTAGACAGTCCAGTTGTTATTGAGTTTgagaaagtgaaagaaaaacCTGAGGAAAAGCTGGAATGTCGANNNNNNNNNNNNNNNNNNNNNNNNNNNCCATTACATAAACAAGAGCATTTGCGTTACCTGAGATCATTCCGAGAAGTAAATGAAGTTCAAGGACAACTCGCTTTAATAAATTCTAAAGCTGGAATGTCGATGAGAACGTCTTATGAAGTTATGGGTCAAGGAGTTGGAGGCACGGAGAATCTTCCTTTTCGGTTTTCAGACTTAAAGAACTATCTAATGACAATTCGTCAAAAGGAGATGGTGGTAGGTGAAGCAACTGTAATTCAAGAATTTTTTAGAAACGAAGCTTTCTCGAAACCATCTTTTTACTATGATATCCAAGTTGATGTTGCAGAAGACATAGCTAGCATTTTTTGGGCAGATGGAATTATGCAACTAGATTATTCTCTATTTGGCGATGTCATCAGTTTCGAATCAACCCgctttaatttaaaacatgagAGAAGTTCAAAATACTAA	864	0.3356	MDSTFTSSGIAIGDIHSTEASGIEQLTSSDSSQCYYPSNNKSWESLVFHSIKEIEDFYGKYAYQTEFFIRSMLKSKNNSQNKKSDKVHYVHYVCNKQGFKRGSLLNPKNKPRLDSPVVIEFEKVKEKPEEKLECRXXXXXXXXXPLHKQEHLRYLRSFREVNEVQGQLALINSKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTIRQKEMVVGEATVIQEFFRNEAFSKPSFYYDIQVDVAEDIASIFWADGIMQLDYSLFGDVISFESTRFNLKHERSSKY	287

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu01g02195	287	PANTHER	OS01G0607050 PROTEIN	46	280	-	-
	Tsu01g02195	287	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	46	280	IPR031052	GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu01g02195	Tsu-Chr1	23011113	23012154	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Tsu01g02195		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu01g02195	-		-	mtr:MTR_0558s0020	370.933