Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02128 ATGGCCACCAAATCTAACCGCCGACATAACAACGACAATTTAGACGGTTGCTGCTGCAGCAGATGTCTCTGCGGCTGTTTCAACTGCTGCTGCAGATGTCTCTGCAGCTGTATCGGCTACTTTTTCAACTACATCTTAAGCATTATCTGCAACATCATTATCGCCGTAGTAATATTCGCGGTTCTCTTTTGGCTTATCGTTCATCCAAACTACATCAAATTCACTATAACTGATGCATCCCTTACTCAATTCAACTTCAGAAACAACAACACACTTCATTATGATCTTTCCGTCAACATTATGATCAGAAACCCAAATCGAAGAGTTGGTATCTACTACGATAACATCGAAATGCTTGCATTTTATAAGGATGTTAGGTTTGGTTCTCAAACTTTTGGAAAATTCTTTCAGAGTCATAAGAATACGAGTTTTTTGAAAGCAGTTTTTAGAGGTCAGAAAGTGATTGCTTTAAGTTCTGATCAGATTCGGGAACTGAATAAAGGGACGAAAAATGGAGTTTATGCAATTGTTGTGAAGGTTTTTCTCAAAGCAAGGtttaaatttggttttttcaaGACATGGGAAGGGAATCCTAAGGTTGGCTGTGATTTGCAGGTTCCTTTGAAATCGGGCAATGAGATTTCGTCCGGTAatgagtttctagccactaattGTGATTGGGATGACAAATGGTGGTTGTTCCGTTAG 708 0.3771 MATKSNRRHNNDNLDGCCCSRCLCGCFNCCCRCLCSCIGYFFNYILSIICNIIIAVVIFAVLFWLIVHPNYIKFTITDASLTQFNFRNNNTLHYDLSVNIMIRNPNRRVGIYYDNIEMLAFYKDVRFGSQTFGKFFQSHKNTSFLKAVFRGQKVIALSSDQIRELNKGTKNGVYAIVVKVFLKARFKFGFFKTWEGNPKVGCDLQVPLKSGNEISSGNEFLATNCDWDDKWWLFR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02128 235 PANTHER OS05G0367900 PROTEIN 10 229 IPR044839 GO:0098542
Tsu01g02128 235 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 10 229 - -
Tsu01g02128 235 Pfam Late embryogenesis abundant protein 100 197 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02128 Tsu-Chr1 22218546 22219253 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02128 66 217 SNARE and Associated Proteins AT1G32270 36.842 2.00e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02128 - - aprc:113873272 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04085 07 46719887 46720570 Tsu01g02128 01 22218546 22219253 PCT