Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02126 ATGCTGCGAAGCGGAAAAGAGTTACAGGATCCCCCTGCTGGAATAGTTAGAAGTCATGACCTAGGAAAAGTTGTAGAGAAGGACACTACAAAAGATACTTGGAGTGAATCAATGATAGTTGACAGTGGACAAACACTCAAGTCTAAGAAGGCAGGGGAAAATGAAAAGGAAACACCATATGTACCCCCTCCTCCTTACAAGCCTCCAATTCCATTTCCTCAAAGACTTGTCAAACCTAAGAATCCAGGGTNGAGCCTTATCCCCACTTTTCCAGGAAAAGAATTTGTTCCGCTTTTTTGCTGCTGCTGTCTCTGGATCTTCATAATCATATACGCAATCGTCAGTTTCTTCATCTGGCTCATCGTTCGACCTAACGATGCCAATTTCACCGTCACCGATGCATCTCTTgctcaattcaatttcaaaaacaacaacacacTTCACTATGATCTCGCCGTTAACATCACGATCCGAAACCCTAATGGAAGACTTGGTATCTATTACGATAACATCGAAACGCTTGCGTTTTATAAAGATGTTAGGTTTGGTTCACAAACTTTAGGTCAATTCTTTCAGCATCGTAAGAGTACGAGTTTTGTGAACCCTAATTTGAAAGGTCAACAAGTTGTTCCTTTGAATTCAGATCAGATTTCGGAGtttgataaagaaaagaaagacgGCGTTTTTGATATTGATGTGAAGGTTTTGCTTAATGTCAGGTTTAAATTGGGTTTGTTTAAGATTCGGAATGGGAAACCTAAGGTTCATTGTGATTTGCAAGTTCCTCTGAAATCAAGCAATGGAGAATTATTGGGTAATGGGTTTCAAGCTACTCATTGTGATTGGGTTTATAAATGGTACTTATTCCATTAG 873 0.3769 MLRSGKELQDPPAGIVRSHDLGKVVEKDTTKDTWSESMIVDSGQTLKSKKAGENEKETPYVPPPPYKPPIPFPQRLVKPKNPGXSLIPTFPGKEFVPLFCCCCLWIFIIIYAIVSFFIWLIVRPNDANFTVTDASLAQFNFKNNNTLHYDLAVNITIRNPNGRLGIYYDNIETLAFYKDVRFGSQTLGQFFQHRKSTSFVNPNLKGQQVVPLNSDQISEFDKEKKDGVFDIDVKVLLNVRFKLGLFKIRNGKPKVHCDLQVPLKSSNGELLGNGFQATHCDWVYKWYLFH 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02126 290 MobiDBLite consensus disorder prediction 43 64 - -
Tsu01g02126 290 Pfam Late embryogenesis abundant protein 154 248 IPR004864 -
Tsu01g02126 290 PANTHER OS05G0367900 PROTEIN 100 284 IPR044839 GO:0098542
Tsu01g02126 290 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 100 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02126 Tsu-Chr1 22190565 22191437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02126 121 268 SNARE and Associated Proteins AT1G32270 36.000 2.70e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02126 - - aprc:113873272 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04086 07 46723476 46724192 Tsu01g02126 01 22190565 22191437 PCT