Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02124 ATGGCCGGTAACCAACTTAACGGCGCGTACTACGGTCCGTCAATTCCACCGCCGCAGCAGCAGAAACCCTACCGCCGCCACAACGACGACGGTTGCGGCTTCTGCAGCTGTCTCTGCGGCTGTTTCAGAGGCTGTTGTGGTTGCATCTTCAACTGCATCTTAAGTATAATCTGCAAAATCCTCaccacaatcatcatcatcatcgtaaTCCTCGGTTTCCTCTTCTGGCTTATCGTTCGACCTAACGTCGTCGATTTCACCGTCAACGATGCATCCCTTACTCAATTCAATTTCACAAACAACAACACACTTCACTACGATCTTGCCGTTAACATCACAATCCGAAACCCTAATCGAAGAGTTGGTATCTATTACGATAACATCGAAACGCTTGCGTTTTATAAAGATGTTAGGTTTGGTTCACAAACTTTAGGTCAATTCTTTCAGCATCATAAGAATACGAGTTTCTTGAACCCTGTTTTTAAAGGTCAACAAGTTCTTCCTTTGAATTCAGATCAGATTTCGGAGTTtgataaggaaaaaaatgatgGTGTTTTTGATATTGATGTGAAGATTTTGCTTAATGTTAGGTTTAAATTGGGTTTGTTTAAGAGTGGGAAAGCGAAACCTAAGGTTCATTGTGATTTGAAGGTTCCTCTGAAATCAAGCAATGGAAAATTGGTTGGTAATGGGTTTCAAGCTACTGATTGTGATTGGGATTATCAATGGAAGTTGTTCCATTAG 744 0.3952 MAGNQLNGAYYGPSIPPPQQQKPYRRHNDDGCGFCSCLCGCFRGCCGCIFNCILSIICKILTTIIIIIVILGFLFWLIVRPNVVDFTVNDASLTQFNFTNNNTLHYDLAVNITIRNPNRRVGIYYDNIETLAFYKDVRFGSQTLGQFFQHHKNTSFLNPVFKGQQVLPLNSDQISEFDKEKNDGVFDIDVKILLNVRFKLGLFKSGKAKPKVHCDLKVPLKSSNGKLVGNGFQATDCDWDYQWKLFH 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02124 247 MobiDBLite consensus disorder prediction 1 22 - -
Tsu01g02124 247 PANTHER OS05G0367900 PROTEIN 21 241 IPR044839 GO:0098542
Tsu01g02124 247 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 241 - -
Tsu01g02124 247 Pfam Late embryogenesis abundant protein 111 212 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02124 Tsu-Chr1 22155767 22156714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02124 78 225 SNARE and Associated Proteins AT1G32270 38.000 2.23e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02124 - - aprc:113873272 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02124 01 22155767 22156714 Tsu01g02124 01 22155767 22156714 ECH