Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02119 ATGGCGGAAGCGCAACCCCATAACTGCTGTGGAAGATGTTGTTGTTGCCTCTTTGGCGTAATTTGGAAGCTCGTCATAGCAATAATCATCCTCATAGTTCTCGCAATCctcattttcttctttattgttCAACCCCACTCCTTCAAATTTAGTGTCAAAGAAGCCAAACTAACCGAATTCAACTACAACAACAATACCCTCCGTTACAACCTCATGCTCAATTTCACGGCTCATAACCCAAACAAAAAACTCACCATCTACTACGATAAAATGGAAGGACGTGTGTCCTATGAAGGAACTAGGTTCGCGACAATGGATGATGTGAATTCCTTCCGTCAAGACACTAAAAAAACGAATCGTATTAGTGGTGTTTTCTCTGGACAACGTGTTGTGGTTTTTGATCATGATCAGGTTTCTGACATTGAACGTGATAAGAAAGATGGagcttttcattttgatgtGAAGTTGTACTTTAGGATTAGGTTTAGGCTTGGTGATTTtattgatgaagatgatattAAGGGTAATATTAAATGTGGTCTTGATGTTCCTTttgttgcttcaaaaaataatgGGACTAAGGTCATGAATGCATTTGAACCCACCACGTGCGATGTTAATTTGTGA 627 0.3589 MAEAQPHNCCGRCCCCLFGVIWKLVIAIIILIVLAILIFFFIVQPHSFKFSVKEAKLTEFNYNNNTLRYNLMLNFTAHNPNKKLTIYYDKMEGRVSYEGTRFATMDDVNSFRQDTKKTNRISGVFSGQRVVVFDHDQVSDIERDKKDGAFHFDVKLYFRIRFRLGDFIDEDDIKGNIKCGLDVPFVASKNNGTKVMNAFEPTTCDVNL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02119 208 Pfam Late embryogenesis abundant protein 75 167 IPR004864 -
Tsu01g02119 208 PANTHER OS05G0367900 PROTEIN 11 206 IPR044839 GO:0098542
Tsu01g02119 208 PANTHER PROTEIN, PUTATIVE-RELATED 11 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02119 Tsu-Chr1 22102022 22103154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02119 42 193 SNARE and Associated Proteins AT1G32270 29.412 2.51e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02119 - - gmx:100795302 201.06