Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02085 ATGGCGAATTTCCCCCCTCAATCACCCTCTATGAAGAAAGATGAATTGAATCCTAGTGTATGTGCCTCCAGCACTGATTCCACCAGGATGATGTACGCAAAACGTCTTGTTATTGAACTGATCAATCCCGATCTACGGGATAATGCTCTCAATGTGCTCTCCAAGATGACTGATTTATTTCAAGAACTGGCACCATTATTGTGGAATTCTTTTGGTATTATTGCAACATTTTTACAGgAAATAGTTTCAATATATCGTGTACTTTCAACTCCAAATCTTACTCATGCACAATCAATTCGAGTATGCAATGTTCTTGCCCTACTTCAGtgCATGGCATCCCACCCTGTTACAAAGATACCATTTCTGAAAGCTAACATGCCTCTATATTTGTATCCCTATCTTCGCCCATCATACAAGTTGGCACCATATGAGGATTTGAGACTTGCTACTCTTGGAGTCATTGCTGCCACAGTCAAGGTTAAGACAAGAGAAGCCATAGATTTTCTTCTGTCAAGTGAAGTCATGCCGCTGTGCCTACAAAGTATTGAAGTTGGCAGAGAACTGTCAAAAACCGTTGCTACTTTTATTGTTGAGAAAATTCTGTCAGATCATGTTGGTATGGCTTATGTTTGTGTTCTACCAGAACGCTATTATGCAGTAGCCCGAGCTTTGAACACGTTGGCAGGTTCTCAGAATCAACCTTCCGCGCGTCTTGTGAAGCTGTTGGTTTCATGTTATACTTATCTCTCAGAAAAAGAAGGATTTTTTATGCAGAAAACAATTCCACCACCATCTTAA 798 0.4023 MANFPPQSPSMKKDELNPSVCASSTDSTRMMYAKRLVIELINPDLRDNALNVLSKMTDLFQELAPLLWNSFGIIATFLQEIVSIYRVLSTPNLTHAQSIRVCNVLALLQCMASHPVTKIPFLKANMPLYLYPYLRPSYKLAPYEDLRLATLGVIAATVKVKTREAIDFLLSSEVMPLCLQSIEVGRELSKTVATFIVEKILSDHVGMAYVCVLPERYYAVARALNTLAGSQNQPSARLVKLLVSCYTYLSEKEGFFMQKTIPPPS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02085 265 PANTHER UNCHARACTERIZED 6 253 - -
Tsu01g02085 265 MobiDBLite consensus disorder prediction 1 22 - -
Tsu01g02085 265 Gene3D - 32 260 IPR011989 -
Tsu01g02085 265 SUPERFAMILY ARM repeat 42 201 IPR016024 -
Tsu01g02085 265 Pfam Cell differentiation family, Rcd1-like 36 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02085 Tsu-Chr1 21425300 21430949 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Tsu01g02085 Rcd1 2.7e-81 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02085 K12606 - oeu:111395739 265.003