Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02060 ATGTATTTATCAACCACAATGTTCATACTTTTCTTAGCATGCATTACTATTATAATCTTTCTACCACTCATTAGAagaatcaaaaaacaaaattacaatctTCCACCAGGACCTTCACTTCTTTCAATtatgtttaatatttttgaacTAGCAAAAAAACCACAATATTCATTAGCCAAATTCTCCAAAAAACATGGTCCAATAATGCATATTAAGCTAGGTCAAATATCAACCATAATAATTTCTTCACCAAATATAGCACAAGAAGTGCTTCAAACACATGATAGATTATTCACAAATAGACCAATTCCTGAAGCTGTTAAAGTTCTTGGTCATGATCATTTTAGCTTACCCTTTATGCCAGCTTCAAATCTTTGGAAAGACTTAAGAAAACTAAGcaaaaatcatttgttttctaaGAAAACTCTTGATGCTAGTAATGAACTTAGGTGTAGGAAGTTACAACAACTTTTAAGTGATATAGATAAAAGTAGCTTAATTGGTGAAGTTGTGGATATTGAAAAAGCTGCTTTTAAGACTTCATTGAATTTTATgtcaaatacttttttttctatGGATTTTGTTAACTCTGCAGGTGAAATTGATGAGTATAAAGATATAGTTGAAAATCTTATAAGAGTAATAGCAACACCAAACTTGGTTGATTTTTTTCCACTTTTGAGGATGCTTGATCCACAAGGTATAAGAAGAACTTCAACTACTTATGCTGAAAAGTTGTTGCAAATAATTGATTCTTATATTAGCAAAAGGTTGGAGTTAAGAAAAGGTGAAAATTATGTGACAAATGATGATGTGTTAGACACTTTGCTCAATATTTCTCAAGAGGATGGCCAAAAGATGGACAACACACAGATCAGACATTTGTTTCTTGATTTATTTGTTGCGGGAACTGATACAACTTCCTACGCAATAGAACGAGCAATGGCGGAACTAGTTCACAATCCACATGCAATGTTAAAAGCAAAAGAAGAACTTGAGCAAATAATTGGTATAGGAAATTCAATTGATGAATCAGACATTACTAGACTCCCATATTTGCAAGCCGTTGTAAAAGAAACATTACGTTTGCACCCATCAGCTCCACTTTTGTTACCAAGAAAAGCCAATATTGAGGTAAAAGTTCATGGATACATTATTCCACTAGGGGCACAAGTTATAATTAATGAATGGGCCATTGGAAGAAATCCAAACATTTGGGATAATCCAAATTTATTTTCACCTGAGAGAACGTTACATATGATGATAGGATCATTGATTAACTTCTTTGATTGGAAATTGGAAAATGGAGATAGAGACATTGATGAACCCTTAAGAGCTATTCCATTTAGAGTAAAGAAGGTGTAA 1365 0.3106 MYLSTTMFILFLACITIIIFLPLIRRIKKQNYNLPPGPSLLSIMFNIFELAKKPQYSLAKFSKKHGPIMHIKLGQISTIIISSPNIAQEVLQTHDRLFTNRPIPEAVKVLGHDHFSLPFMPASNLWKDLRKLSKNHLFSKKTLDASNELRCRKLQQLLSDIDKSSLIGEVVDIEKAAFKTSLNFMSNTFFSMDFVNSAGEIDEYKDIVENLIRVIATPNLVDFFPLLRMLDPQGIRRTSTTYAEKLLQIIDSYISKRLELRKGENYVTNDDVLDTLLNISQEDGQKMDNTQIRHLFLDLFVAGTDTTSYAIERAMAELVHNPHAMLKAKEELEQIIGIGNSIDESDITRLPYLQAVVKETLRLHPSAPLLLPRKANIEVKVHGYIIPLGAQVIINEWAIGRNPNIWDNPNLFSPERTLHMMIGSLINFFDWKLENGDRDIDEPLRAIPFRVKKV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02060 454 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 419 - -
Tsu01g02060 454 SUPERFAMILY Cytochrome P450 35 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 Pfam Cytochrome P450 35 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 416 451 - -
Tsu01g02060 454 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 4 419 - -
Tsu01g02060 454 PANTHER CYTOCHROME P450 FAMILY PROTEIN 416 451 - -
Tsu01g02060 454 Gene3D Cytochrome P450 26 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g02060 454 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02060 Tsu-Chr1 21105689 21107729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02060 7 442 Cytochrome P450 AT2G45550 38.075 1.43e-118 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02060 - - gmx:100792017 561.992