Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02052 ATGGAATCTGAAAATGGAGTTGTTATGGAAGATGAGAAACATGTTATTGGAGAAACAACTAAGGAAAGCATAcataaagaaattgaagagaatTTGAATGCAGAAATTCAACCCAAGAATGAAGTATCTCAATCCATAGTAGAAATTGATGGCAACAATTCTGCAGTTAGTAAAATCTCCAAACATGCCAAGGAACATGGTTTGAAAAGTGGTGTTGCTACAAAGAACACTAAATCTGCTACCAAAGATAAACCAAATTTGAAGGCAACAACTTCATCATCTCAAACACAAAGACAACAAAACCTTTCCAAGAGCCTTACTTTTCCATCGAAAATAGCTCGTGTCGATGCTATGAAGAAAAGCACTGATGGAATTCTTctgaagaaagaaaataagaatgTTCAAGCTGTGACTTCAACTATTCATTCAAGAAAGTTGACAAACTCAAAAGTGAACTCAAAGGAGACAAAAACAAACCATGGAAATTCTAAACAAATTACTTCTTTAACATCCAATAATAGCTTTAAAAGCTCTGAGCATGGAAGGACTTCCAATGTCAATGCAGTTGCCAAGAGCCATACATCCGAGGCATCGTTACCTGTTGATCAGAATTCAAACCCTGCAAAAAGTGAAAAGCCGAATAAAGAAGACGATGATGTTCATTCTACAACTTCAAGTCTTACTCCTAGTAGGAAAAGCAATGGTTTTGGATTTTCGTTTAGATTGGAAGAACGAgctgaaaaaagaaaagagTTCTTCTCAAAGTTGGAAGAGAAAATTCAAGAAAAGGAAGCAGAAAAAAGCAATCTGCAAGAGAAATCGAAGGAAAGCCAGGAGGCAGAGATcaagaaattaagaaagaagATGACATTCAAAGCAGCTCCAATGCCAAGTTTCTATAAGGAACCTCCTCCAAAAGTTGAACTAAAAAAGATACCTACAACACGCCCAAAATCACCAAAGCTCGGAAGAAACAAGGGATCTGTTGTGAACAACAACTCGGAAGATAAATCTAGTTCTATCCTACATGAAAAGCAACAGCAGAATGATTCAACCAAAGCAAAGATAAAGGGTTATAAAGATGTCAGTTCAaagaaaccaataaaaaaaactcaagcTAAGGTACAATCTCAGGAAATTGCAGTCACAAAAACTGAATTAGATTCTGCTAGGTCTACTGCAAATGAGGTTTCAATAATAATCAACCAAGATGCAAAAGAAGATATAAGAGAAGGCATTGAAGAATGTAAAGATCTACCTGTTGACATATCTGAATATCAAAATGGGATGGAACTAGAATCACAAAATGATCTTGATCAAAACAGTGCACTGGTCTTAAATGCATCCACACCAGAAATTGTATCTTATGAAGTTACTGTTGTGTAG 1386 0.3362 MESENGVVMEDEKHVIGETTKESIHKEIEENLNAEIQPKNEVSQSIVEIDGNNSAVSKISKHAKEHGLKSGVATKNTKSATKDKPNLKATTSSSQTQRQQNLSKSLTFPSKIARVDAMKKSTDGILLKKENKNVQAVTSTIHSRKLTNSKVNSKETKTNHGNSKQITSLTSNNSFKSSEHGRTSNVNAVAKSHTSEASLPVDQNSNPAKSEKPNKEDDDVHSTTSSLTPSRKSNGFGFSFRLEERAEKRKEFFSKLEEKIQEKEAEKSNLQEKSKESQEAEIKKLRKKMTFKAAPMPSFYKEPPPKVELKKIPTTRPKSPKLGRNKGSVVNNNSEDKSSSILHEKQQQNDSTKAKIKGYKDVSSKKPIKKTQAKVQSQEIAVTKTELDSARSTANEVSIIINQDAKEDIREGIEECKDLPVDISEYQNGMELESQNDLDQNSALVLNASTPEIVSYEVTVV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02052 461 MobiDBLite consensus disorder prediction 132 208 - -
Tsu01g02052 461 PANTHER PROTEIN WVD2-LIKE 4 1 460 IPR044833 GO:0008017
Tsu01g02052 461 MobiDBLite consensus disorder prediction 338 368 - -
Tsu01g02052 461 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 460 - -
Tsu01g02052 461 MobiDBLite consensus disorder prediction 1 20 - -
Tsu01g02052 461 Pfam Targeting protein for Xklp2 (TPX2) domain 238 307 IPR027329 -
Tsu01g02052 461 MobiDBLite consensus disorder prediction 261 288 - -
Tsu01g02052 461 MobiDBLite consensus disorder prediction 261 375 - -
Tsu01g02052 461 MobiDBLite consensus disorder prediction 72 108 - -
Tsu01g02052 461 Coils Coil 246 288 - -
Tsu01g02052 461 MobiDBLite consensus disorder prediction 60 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02052 Tsu-Chr1 21014216 21017301 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02052 - - gmx:100798810 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g04119 07 47026751 47036984 Tsu01g02052 01 21014216 21017301 PCT