Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02036 atggGCAACAACTGCGTTGGACCAAACCTCGGCGGAAATGGTGGTTTCCTTCAATCCGTTTCGGCTGCCGTTTGGAAAACACGTCCGCCGGAGCAAAGACTTCCTGCACCTGACTCCACCGACGACAAAGACAAAAATCAGTCTCCAGCTAATGCTACAACAGAGTCGACTACCACCGGAAAAGGTTCCGAAGGTTCTAATAATCCTCCCATGTCGGTTCAGAATACGCCGCCTGAACCGGTAAAAATAGCATCTGGAGAAGCAAAGCCGCTTCCGCTTGATCATGAAAAGCCTGTTAAAGCTAAACCAGAGGTAGTAAATAATGCACCACCAGCATCTAGTACAACTGGTGGCGGTGGTGGTGAGGGTGCTAAGAAACCTACACATGTGAAAAGGGTATCAAGTTGTGGACTTCAGGTAGATTCTGTATTGGGTAGAAAAacagagaatataaaagaatattttagtTTGGGAAGAAAATTAGGGCAAGGGCAATTTGGGACAACATTTTTATGTATGGAGAAAGGGACTAATAAGGAATTTGCATGCAAATCAATTGCAAAGAGGAAATTAACAAATCAAGAAGATGTTGAGGATGTTAGAAGAGAGATTAGGATAATGCATCACTTAGCTGGTCACCCAAATGTGATACAAATAGTTGGTGCTTATGAAGATGCTGTTGCTGTTCATGTTGTTATGGAGTTATGTGCTGGTGGTGAACTTTTTGATAGGATTATACAGAGAGGGCATTATACTGAGAGAAAAGCTGCTGAACTTGCTAGGTTGATTTTAGGTGTTGTTCAAGCTTGTCATTCTTTAGGTGTTATGCATAGAGACTTGAAGCCTGAGAATTTCCTTTTTGTTAGTCATGAAGAAGAATCTCGGCTTAAGACAATTGATTTTGGACTCTCTGTGTTTTTCAGACCAgGTGAAACATTTACTGACGTAGTTGGGAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGAACTATGGTCAAGAGTGTGATGTTTGGAGTGCTGGGGTGatcatttatattttactcAGTGGAGTTCCTCCATTCTGGGATGAAACGGAACAAGGAATATTTGAGCAAGTATTGAAAGGAGAGCTTGACTTTATTTCTGAACCATGGCCCAGCATATCTGAAAGTGCAAAGGATCTTGTTCGAAAAATGCTTGTAAGGGATCCTAAGAAGCGGTTAACGGCACATGAAGTTCTTTGCCATCCTTGGGTTCAGGTTGGTGGTGTTGCCCCTGATAAACCACTTGATTCTGCGGTCTTATCTCGTTTAAAGCAATTCTCTGCAATGAACAGGCTCAAGAAAATAGCCATTCGAGTAATTGCTGAAAATATGTCTGAGGAGGAAATTGCAGGACTGAAAGAAATGTTCAGGATGATAGACGCAGATAATAGCGGACAGATCACTCTTGAGGAACTGAAAAAAGGTTTAGAGAGAGTGGGTTCCGTTCTGAAGGATTCTGAAATTACGTGGTTAATGCAAGCGGCAGACATTGATAATAGTGGTACCATAGACTATGGTGAATTTATAGCAGCCATGCTTCATCTAAACAAGGTCCAGAAGGAGGATCATCTATTTGCAGCCTTTAACTACTTTGACAAAGATGGTAGTGGATACATTACAAAGGATGAGCTTCAACAAGCCTGTCAACAGTTTGGCCTACAAGAGGATCATCTAGACGATATAATACGTGAAGCTGATAAGGATAATGATGGACGCATTGACTACAGCGAATTTGTTGCAATGATGCAAGACACTGATTTTGGCAAAAAGGGGATATAA 1806 0.412 MGNNCVGPNLGGNGGFLQSVSAAVWKTRPPEQRLPAPDSTDDKDKNQSPANATTESTTTGKGSEGSNNPPMSVQNTPPEPVKIASGEAKPLPLDHEKPVKAKPEVVNNAPPASSTTGGGGGEGAKKPTHVKRVSSCGLQVDSVLGRKTENIKEYFSLGRKLGQGQFGTTFLCMEKGTNKEFACKSIAKRKLTNQEDVEDVRREIRIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLILGVVQACHSLGVMHRDLKPENFLFVSHEEESRLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKNYGQECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISEPWPSISESAKDLVRKMLVRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNRLKKIAIRVIAENMSEEEIAGLKEMFRMIDADNSGQITLEELKKGLERVGSVLKDSEITWLMQAADIDNSGTIDYGEFIAAMLHLNKVQKEDHLFAAFNYFDKDGSGYITKDELQQACQQFGLQEDHLDDIIREADKDNDGRIDYSEFVAMMQDTDFGKKGI 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02036 601 ProSitePatterns EF-hand calcium-binding domain. 575 587 IPR018247 -
Tsu01g02036 601 ProSitePatterns EF-hand calcium-binding domain. 541 553 IPR018247 -
Tsu01g02036 601 ProSitePatterns Protein kinases ATP-binding region signature. 161 188 IPR017441 GO:0005524
Tsu01g02036 601 ProSiteProfiles EF-hand calcium-binding domain profile. 564 597 IPR002048 GO:0005509
Tsu01g02036 601 ProSiteProfiles EF-hand calcium-binding domain profile. 456 491 IPR002048 GO:0005509
Tsu01g02036 601 Pfam Protein kinase domain 156 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02036 601 SMART serkin_6 155 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02036 601 MobiDBLite consensus disorder prediction 46 72 - -
Tsu01g02036 601 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 92 594 - -
Tsu01g02036 601 PANTHER SERINE/THREONINE-PROTEIN KINASE 92 594 - -
Tsu01g02036 601 CDD STKc_CAMK 155 412 - -
Tsu01g02036 601 Gene3D Phosphorylase Kinase; domain 1 157 240 - -
Tsu01g02036 601 Pfam EF-hand domain pair 531 592 IPR002048 GO:0005509
Tsu01g02036 601 MobiDBLite consensus disorder prediction 21 130 - -
Tsu01g02036 601 SUPERFAMILY Protein kinase-like (PK-like) 153 414 IPR011009 -
Tsu01g02036 601 SMART efh_1 532 560 IPR002048 GO:0005509
Tsu01g02036 601 SMART efh_1 460 488 IPR002048 GO:0005509
Tsu01g02036 601 SMART efh_1 496 524 IPR002048 GO:0005509
Tsu01g02036 601 SMART efh_1 566 594 IPR002048 GO:0005509
Tsu01g02036 601 ProSitePatterns EF-hand calcium-binding domain. 469 481 IPR018247 -
Tsu01g02036 601 ProSiteProfiles EF-hand calcium-binding domain profile. 528 563 IPR002048 GO:0005509
Tsu01g02036 601 Pfam EF-hand domain pair 473 523 IPR002048 GO:0005509
Tsu01g02036 601 ProSiteProfiles Protein kinase domain profile. 155 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02036 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Tsu01g02036 601 ProSiteProfiles EF-hand calcium-binding domain profile. 492 527 IPR002048 GO:0005509
Tsu01g02036 601 ProSitePatterns EF-hand calcium-binding domain. 505 517 IPR018247 -
Tsu01g02036 601 Gene3D - 420 596 - -
Tsu01g02036 601 Gene3D Transferase(Phosphotransferase) domain 1 241 418 - -
Tsu01g02036 601 SUPERFAMILY EF-hand 453 592 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02036 Tsu-Chr1 20900112 20905255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02036 1 601 EF-hand Containing Proteins AT2G38910 73.388 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu01g02036 Pkinase 2.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02036 K13412 - gmx:100813232 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02036 01 20900112 20905255 Tsu01g02036 01 20900112 20905255 ECH