Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02034 ATGATTTATGGTAGGTGTGCAGCTTGCAAGAGTCAAAGAAGAAGGTGTCCTTCTGATTGCATTTTTTCTCCCTATTTCCCTCCCAATGATCCTCAAAAATATGCTTCTGTTCACCGAGTCTATGGTGGTAGTAATGTTGGGAAAATGCTTCAGCAATTGCCTCACTGTGTAAGAGAACAAGCTGCAAATACAATGTATTTAGAAGCACAATGTAGGATTCAAGATCCTGTTTATGGATGTGTTGGGATTATCTCTAAATTATATCAACAAATCCATGATGCAGAAATTGAGTTGGccaaaattcaaactcaaattactTGTCATAAACTCCAAAATCAACAATATGAAGCTAAATCCAACTTAAGCTCTTTGCCACCACAGAGTATCAATATGGAGATGGAGAATTTTCAATGGCTTAGTCAAGATCTTAATTACTCCAATTAA 444 0.3491 MIYGRCAACKSQRRRCPSDCIFSPYFPPNDPQKYASVHRVYGGSNVGKMLQQLPHCVREQAANTMYLEAQCRIQDPVYGCVGIISKLYQQIHDAEIELAKIQTQITCHKLQNQQYEAKSNLSSLPPQSINMEMENFQWLSQDLNYSN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02034 147 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 118 - -
Tsu01g02034 147 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Tsu01g02034 147 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Tsu01g02034 147 Coils Coil 84 118 - -
Tsu01g02034 147 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02034 Tsu-Chr1 20859506 20860464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02034 5 106 AS2 family AT3G26660 63.725 3.99e-46 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu01g02034 LOB 7e-36 No_clan