Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01991 ATGGAATTCGTTTTTGCGATTACATCTTCTTGTGTTTCAGATGAGATTCGATTTTCAAATTGTGTTATCGGCGTTTATTGCTTTGTTACACAGACAGGATTCGATTTTCCAATATTCTTCTTCAACAGTTCTTCAATGGTGCCATGGACGGACGACTTTCTTCCTCAACACGTTTCAATTCCATCGCAGTATCACTGTCAGAAGCTATGGACCTATGGTGCAAAAAGACATGCTTCCTGTGACCTTCTATGTTTTGTGCTTCCTGGTGACAAGGAGATTTTGGGGAAGTATGAACAGGTGCCAAGGGTGGAGTCAAAATTAAGGGTTACAGAATTTAGGAAGAGTTTAAACACCGTGAACTCTGGCGGTGAAGAGGTCTGGGCCGGAGCGGAGATGACACTAATCGATGCGGTTGCTAATAGTATATGTGCGCCATTGTGGAGGCTATTTGGTGGGGCTTCAAATACTATAATCACTGATATAACAATCCCAATTGTTTCTTCAGCTGAAGCAGCTGAATTGGCTTATAAGTACTATAAAGAAGGATTCGAGACTTTAAAACTGAAATTTATTCTCGATGCTAAAGAAGGGTATAACTCTGACGAAGAAGTGGAAGTTCTTCAGAAATTACACGAAATGGGGTTGATCCCTATTCTATTTGAGCAACCAGTTCATAGAGATGATTGGGATGGTCTTGGATATGTAAGTAACATAGCAAGAGAAAGATATGGAGTATCTGTTGCAGCCAATGAGAGTTGCATAAGTTTAGTTGATGTTTACAGAATAGTAGAAGGGAATATTGTAGATGTCATTAACATAAAGCTTGCAAAAGTTGGAGTTATAGGTGCATTGGATATTGTTGAAAAAGGAAGATCAGCAGGCTTGGATTTGATGATTGGTGGTATGAGCGTTCTTTTGTCTGATTGTCTTCATGAGCGATCTCCTTCCTGGAACAATTAA 960 0.3969 MEFVFAITSSCVSDEIRFSNCVIGVYCFVTQTGFDFPIFFFNSSSMVPWTDDFLPQHVSIPSQYHCQKLWTYGAKRHASCDLLCFVLPGDKEILGKYEQVPRVESKLRVTEFRKSLNTVNSGGEEVWAGAEMTLIDAVANSICAPLWRLFGGASNTIITDITIPIVSSAEAAELAYKYYKEGFETLKLKFILDAKEGYNSDEEVEVLQKLHEMGLIPILFEQPVHRDDWDGLGYVSNIARERYGVSVAANESCISLVDVYRIVEGNIVDVINIKLAKVGVIGALDIVEKGRSAGLDLMIGGMSVLLSDCLHERSPSWNN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01991 319 PANTHER DIPEPTIDE EPIMERASE 125 189 - -
Tsu01g01991 319 PANTHER DIPEPTIDE EPIMERASE 189 302 - -
Tsu01g01991 319 SUPERFAMILY Enolase C-terminal domain-like 145 311 IPR036849 -
Tsu01g01991 319 Pfam Enolase C-terminal domain-like 187 303 IPR029065 -
Tsu01g01991 319 Gene3D - 191 311 IPR036849 -
Tsu01g01991 319 Gene3D - 145 190 IPR036849 -
Tsu01g01991 319 PANTHER O-SUCCINYLBENZOATE SYNTHASE-RELATED 125 189 - -
Tsu01g01991 319 PANTHER O-SUCCINYLBENZOATE SYNTHASE-RELATED 189 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01991 Tsu-Chr1 20255635 20259514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01991 89 135 FH2 protein (formin) Gene Family AT5G07740 47.692 1.40e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01991 - - gmx:100776391 271.937