Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01976 ATGCTTTCTATAACTCATGGACCATCTATAATTTTCTTTACCTTAATCCTTCTTTATCATTCAAATGGACAATTGAATGCAACTTTTTATTCTAACACATGTCCAAATGTGTCCTCCATCGTGAGAAATGCTGTCCAAACCGCTCTACAATCTGATTCGAGAATTGGCGCAAGCCTAACTCGCCTTCACTTTCATGATTGTTTTGTCAATGGGTGTGACGCATCGATTTTGTTAGACCAAGGTGGAAACATTACACAAAGTGAGAAAAATGCAGCTCCCAATTTCAATTCCATTCGAGGGTTTGATGTAATCGATACAATTAAAAGCTCTCTTGAAAGTTCATGCTCAGGCATTGTATCTTGTGCTGATATTCTTGCCCTTGCAGCCGAATCTTCTGTGTCTTtgTCAGGGGGTCCATCATGGAATGTACTACTTGGAAGAAGAGATGGTCTAACAGCTAATCAAGCTGGAGCCAATATCTCCATTCCATCTCCATTTGATACCCTTGCTAATACTACATCTAAATTCTCTGCTGTTAACCTTGATACCACTGATCTTGTTGCATTGTCAgGTGCACACACTTTTGGACGTTCTCAATGCCAATTTTTCTCCCAAAGATTATTCAACTTCAATGGGACTGGAAGCCCAGACCCAACATTAAACACAACATATTTAGCAACACTTCAACAAAATTGTCCACAAAATGGTAACGGTTCTACTTTGAACAACTTTGACCCATCATCTCAAGATACATTTGACAACAACTACTTCACCAATTTATtaaccaaaatgggtcttctcCAAACAGACCAACAACTATTCTCTACCAATGGTTCTTCCACTATTTCAATTGTTAATAGCTTTGCCAACAACCAAACTGCATTTTTTAACCAATTTGCTCAGTCAATGATCAATATGGGTAATATTAGCCCTTTGACGGGAAATCAAGGAGAAATCAGACTCGATTGTAAGAAAGTTAATGGAAGTTGA 990 0.3727 MLSITHGPSIIFFTLILLYHSNGQLNATFYSNTCPNVSSIVRNAVQTALQSDSRIGASLTRLHFHDCFVNGCDASILLDQGGNITQSEKNAAPNFNSIRGFDVIDTIKSSLESSCSGIVSCADILALAAESSVSLSGGPSWNVLLGRRDGLTANQAGANISIPSPFDTLANTTSKFSAVNLDTTDLVALSGAHTFGRSQCQFFSQRLFNFNGTGSPDPTLNTTYLATLQQNCPQNGNGSTLNNFDPSSQDTFDNNYFTNLLTKMGLLQTDQQLFSTNGSSTISIVNSFANNQTAFFNQFAQSMINMGNISPLTGNQGEIRLDCKKVNGS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01976 329 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 ProSiteProfiles Plant heme peroxidase family profile. 24 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PANTHER PEROXIDASE 72-RELATED 10 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 CDD secretory_peroxidase 24 326 IPR033905 GO:0004601|GO:0042744
Tsu01g01976 329 SUPERFAMILY Heme-dependent peroxidases 24 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Tsu01g01976 329 PANTHER PEROXIDASE 10 328 - -
Tsu01g01976 329 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g01976 329 Gene3D Peroxidase, domain 2 163 306 - -
Tsu01g01976 329 Gene3D - 29 327 - -
Tsu01g01976 329 Pfam Peroxidase 41 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01976 Tsu-Chr1 20110443 20112849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01976 9 329 Peroxidase AT5G06720 71.340 6.78e-166 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01976 K00430 - gmx:100811249 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01976 01 20110443 20112849 Tsu01g01976 01 20110443 20112849 ECH