Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01969 ATGTTCAATTTATCAGGACGAGCTTGTTACAATGTTCCATTCAAAATTGCTTCCTTCGTCACCACTTTTCTTCTCAACATAAGTCCTGGAACTTCCTCTGCTGGAGAAGGTATAGCTTTTATCTTAGCTTCAGATCCAAGTCTCCCTGAAAATAGTTCAGGACAATGGCTTGGTATTGTAAATGCTTCCACCAATGGAACTTCTCGAGCTGCAATTCTTGCAGTTGAGTTTGATACAAGACAGAGTTCAACCAAAGACGGTCCTGACAACCATGTTGGAATCAATATAAATAGCATCTCCTCTTTGACACAAGCATCACTGATAAACACTAAGGTGAATCTTTCATCTGGTAATAATAGTTCAACCAAAGACGGTCCTGACAACCATGTTGGAATCAATATAAATAGCATCTCCTCTTTGACACAAGCATCACTGATAAACACTAAGGTGAATCTTTCATCTGGTAATAATGTAACTATAAGAATTGAATATTTCAAAGATGTAATATCTGTTTTTGGTCGAATGAGTGAAAATTCACAAGATTCTATGGAGACCCTTTTGGTATCTCCACCTCTTAATCTCTCTTCCTATTTTAAACAAGAGGTTTATGTTGGTTTCTCTGGTTCAACAAGCAATTATACAGAGCTAAACTGTGTAAGAGCATGGGAATTTAATGGTGGAGAAGATATACATACACATAGTAAGAAAAGCAAACACCTCCTGCAGGTTGCGATTATAGTTCCAACGGTGATAATCCTTGGTGGATTGGTCTTTTTCTTGATTTATTTTCAAAGGAAAAGAAACACTGAGATTCAAGAAGATCCATATCCAAGGATAGAGGATCAAATTCAACACTCATCTATGGCTCCAAAGAAATATCAACTAAAGGAATTGATGAAAGCAACCGGTGGATTCAGCCATCAGAACAAACTTGGTGAAGGTGGATTTGGAACGGTTTATAAGGGTATTCTTGGAAACAACAAAGAGATAGCCGTGAAGAGAGTCTCGAAGAACTCCCGTCAAGGAAAGCAAGAATTTATGGCAGAAGTTACAACAATTGGAAGCCTACACCACAAAAACTTAGTGAAACTCGTTGGCTGGTGCTATGAAAGCAAAGAGCTTCTGCTCGTTTACGAGTTCATGCCTAAAGGAAGCTTAGACAAATACCTATTTAACCAATCAAGTGAATTAGAATTACAATATTCAAAAGTACTTGATTGGAAAACTAGGAATAGCGTGATTCGTGATGTAGCGCAAGCATTGGATTATCTTCATAATGGTTGTGAAAGAAGGGTACTTCATAGGGATATTAAAGCAAGCAACATAATGTTGGACTTAGATTACGTCGCTAAACTTGAAATTGAAATTGTGCTTGTTCTTGGTTTGGCATGTTGTCATCCAAATCCAAATGAAAGGCCATCAATGAAAACTGTTTTAATGGTTTTAAATGGACAAGCTTCTTCTCCAATTGTTCCAATGGAAAGGCCTTCTTTTGTTTGGCCTGCTATGCCTTCATCTTTCAAAGAAGGTGAAGATAATTCTCTTATCAATGGATCACTCAGTCCATTCACTCAACTTACTGgcagatag 1590 0.373 MFNLSGRACYNVPFKIASFVTTFLLNISPGTSSAGEGIAFILASDPSLPENSSGQWLGIVNASTNGTSRAAILAVEFDTRQSSTKDGPDNHVGININSISSLTQASLINTKVNLSSGNNSSTKDGPDNHVGININSISSLTQASLINTKVNLSSGNNVTIRIEYFKDVISVFGRMSENSQDSMETLLVSPPLNLSSYFKQEVYVGFSGSTSNYTELNCVRAWEFNGGEDIHTHSKKSKHLLQVAIIVPTVIILGGLVFFLIYFQRKRNTEIQEDPYPRIEDQIQHSSMAPKKYQLKELMKATGGFSHQNKLGEGGFGTVYKGILGNNKEIAVKRVSKNSRQGKQEFMAEVTTIGSLHHKNLVKLVGWCYESKELLLVYEFMPKGSLDKYLFNQSSELELQYSKVLDWKTRNSVIRDVAQALDYLHNGCERRVLHRDIKASNIMLDLDYVAKLEIEIVLVLGLACCHPNPNERPSMKTVLMVLNGQASSPIVPMERPSFVWPAMPSSFKEGEDNSLINGSLSPFTQLTGR 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01969 529 Gene3D Transferase(Phosphotransferase) domain 1 381 453 - -
Tsu01g01969 529 CDD lectin_legume_LecRK_Arcelin_ConA 3 225 IPR001220 GO:0030246
Tsu01g01969 529 Gene3D Phosphorylase Kinase; domain 1 267 380 - -
Tsu01g01969 529 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 453 515 - -
Tsu01g01969 529 Pfam Legume lectin domain 121 237 IPR001220 GO:0030246
Tsu01g01969 529 Pfam Legume lectin domain 5 119 IPR001220 GO:0030246
Tsu01g01969 529 MobiDBLite consensus disorder prediction 510 529 - -
Tsu01g01969 529 SMART serkin_6 305 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01969 529 Pfam Protein tyrosine and serine/threonine kinase 307 451 IPR001245 GO:0004672|GO:0006468
Tsu01g01969 529 SUPERFAMILY Protein kinase-like (PK-like) 286 452 IPR011009 -
Tsu01g01969 529 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Tsu01g01969 529 PANTHER - 2 120 - -
Tsu01g01969 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Tsu01g01969 529 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 120 452 - -
Tsu01g01969 529 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 2 120 - -
Tsu01g01969 529 ProSiteProfiles Protein kinase domain profile. 305 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01969 529 SUPERFAMILY Concanavalin A-like lectins/glucanases 3 225 IPR013320 -
Tsu01g01969 529 Gene3D - 1 119 - -
Tsu01g01969 529 Gene3D - 120 242 - -
Tsu01g01969 529 PANTHER - 453 515 - -
Tsu01g01969 529 PANTHER - 120 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01969 Tsu-Chr1 19968044 19970527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01969 16 452 Receptor kinase-like Gene Family AT3G53810 35.320 1.80e-72 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu01g01969 PK_Tyr_Ser-Thr 2.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01969 - - gmx:100790353 555.058