Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01942 ATGGCTGAATCAACACCGAACATGGAAAGCAACAACGAAGAAGATGACGACTATATGGCTGACCTTTCTCGTTTTCTTCCTTCCGATTCTATTATTCACCctccaaatccaaaatcatcttcaaaacggATTTCTGAAAAGAAAGATCCTTCAATAAACTCTTCCAAGAGCCATTTGAAAGCGCTTAACTGGCAAGAACGAcgaaaaattgaaagagaaagaaagcaAATACAAGAGGATGAACAAACATTAGCAAAAGTTGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCAAACAAATGGGTTATACACCAGGTTCTGCTCTTGGCAAGCAGGGCTCAGGCAGGGCTGAACCGGTGGGGATTGAAATTCGACGGTCACGAGCAGGTATAGGCTTAGAGGATCCCCACAAGGAGAAAATGAAAAGGGAGGAAATCACGATCAAACATAAAAGGAGGAATGAGCAGGCTCTGATGGAAGAATTTGGGTCTAGGCAGAAATCACGGTGGCAAAGTAGGAGAATTATTGTTAATTTCAACAAGGCTAAGGCTGCCCTTGACCAATTGGAGAATCGGGATATTGTGGAGCCACCAAAGAACGACGATGATGCAGagggtgaagaagaagaagaagaggaagaaataACAGAAGAAGGCTTGCTCGATGTTTTGATGAAACTAAGGGATGAGTTCAATTACTGCCTCTTCTGCGGATGCAAATATGAATCAAGTTCTGCTCTTTTGGATAACTGCCCTGGAATCAATGAAGATGACCACTAA 789 0.384 MAESTPNMESNNEEDDDYMADLSRFLPSDSIIHPPNPKSSSKRISEKKDPSINSSKSHLKALNWQERRKIERERKQIQEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKQGSGRAEPVGIEIRRSRAGIGLEDPHKEKMKREEITIKHKRRNEQALMEEFGSRQKSRWQSRRIIVNFNKAKAALDQLENRDIVEPPKNDDDAEGEEEEEEEEITEEGLLDVLMKLRDEFNYCLFCGCKYESSSALLDNCPGINEDDH 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01942 262 MobiDBLite consensus disorder prediction 1 67 - -
Tsu01g01942 262 PANTHER UNCHARACTERIZED 14 262 IPR039249 -
Tsu01g01942 262 Pfam Domain of unknown function (DUF4187) 210 262 IPR025239 -
Tsu01g01942 262 MobiDBLite consensus disorder prediction 203 220 - -
Tsu01g01942 262 MobiDBLite consensus disorder prediction 191 220 - -
Tsu01g01942 262 Pfam G-patch domain 93 136 IPR000467 GO:0003676
Tsu01g01942 262 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 14 262 - -
Tsu01g01942 262 MobiDBLite consensus disorder prediction 40 54 - -
Tsu01g01942 262 ProSiteProfiles G-patch domain profile. 93 139 IPR000467 GO:0003676
Tsu01g01942 262 SMART G-patch_5 91 137 IPR000467 GO:0003676
Tsu01g01942 262 SMART DUF4187_2 208 262 IPR025239 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01942 85 135 C2H2 Transcription Factor Family AT5G26610 45.098 4.35e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01942 - - gmx:100806249 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01942 01 19651684 19654272 Tsu01g01942 01 19651684 19654272 ECH