Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01927 ATGACTTTAATATTGGTAGACTATGTCCAACTCTTCTTCCTTTGGCTACTCTTCACCATTGCAATTCAAGTCATACTAActagaaagaaaaacaagaaccaTCTCACTCCACCAAGCCCTCCATCACTACCTATCATAGGACACCTTCACCTTATTTCTAAATTACCTCACCAAAGTTTTCACAAACTCTCAACACAATATGGTCCTATAATGCAAATTTTCTTAGGTTCTAAGCTATGTTTAGTAACTTCAAGTCCAGAAATAGCAAAAGAGTTTCTTAAagccaatgaaacttatttctcCAACCGAATTATGAGTTCTGCAGTTGAGTACTTATCATATGGCTTAAAGGGTTTCTTGTTTGCACCTTATGGTGACTATTGGAAGTTCATGAAGAAGATGTGCATGTCAGAGCTTCTTGGTGGAAGAACTCTCGATCAACTCCGTCCCTTAAGGCAACAAGAGACTTTAAGGTTTGTGAGGCTCTTGCACAAGAAAGGGGAAGCTCGCGAGGTCGTTGATGTCGGTGATGAGCTCTTGACACTTACCAATAACATCATAACAAGGATGATAATGAGAAAAACTTGTTATGAGAGTGATGGTGATGTTGAAGATATTAGGAAGATGGTGAAAGATACTGCAGAACTTGCAGGGAAGTTTAATGTGTCagattttatttggttttgtaaaaatttggattttcaGGGAATGAATAAAAGGCTTAAAGGGATTAGGGACAAGTTTGACACAATGATGGAGAGAGTGATAAAGGAACATCAagaggaaaagaagaaaaggaaggaaaagGGTGAAGGTGTAATTGCTCATGTTAATGATCTACTTGATATTTTGCTGGAAATACTTGAAGATGAGAGCACTGAAATCAAATTAACTATGGAGAATGTCAAGGCTTTCATCTTGGATATATTTATGGCAGGAACAGATACATCTGCTATAACAATTGAATGGACTTTGGCTGAGTTAATAAACAATCCAGAAGTAATGGACAAAGCAAGACAAGAGATTAATTCAGTAATGTTAGATCTGAATAGATTAATAGAAGAGTCAGATATTCCAAATCTTCCATACTTGCAAGCAATTGTCAAAGAAACACTAAGAATTCACCCTACAGCACCAATTTTAGGTAGAAAATcttttgaaagttgttttgtttatgGTTATGAGATTCCAGCAAACACcaatttgtttgttaatttatGGTCTATGGGTAGAGACCCTAAACTTTGGGAAAACCCACTTGAGTTTAGGCCAGAGAGGTTTATGAATGAAGATAATAAGTTTGATGTAAGGGgacaaaattttcaatttatgcCATTTGGAACTGGAAGAAGAGCTTGTCCTGGTGCTTCATTAGCACTTCAAGTTGTTCCAACAAATCTTGCTAATATGATTCAATGTTTTGAGTGGAAGGTTGATGGTGATGGAGTAGTTAGCATGGAAGAGAAAGCAGCTATGACCCTTCCAAGGGCTCATCCTTTGATGTGTGTTCCTATACCCCGTTTTAATAGAATTCCTTCCGGTGTTAATTGA 1551 0.3398 MTLILVDYVQLFFLWLLFTIAIQVILTRKKNKNHLTPPSPPSLPIIGHLHLISKLPHQSFHKLSTQYGPIMQIFLGSKLCLVTSSPEIAKEFLKANETYFSNRIMSSAVEYLSYGLKGFLFAPYGDYWKFMKKMCMSELLGGRTLDQLRPLRQQETLRFVRLLHKKGEAREVVDVGDELLTLTNNIITRMIMRKTCYESDGDVEDIRKMVKDTAELAGKFNVSDFIWFCKNLDFQGMNKRLKGIRDKFDTMMERVIKEHQEEKKKRKEKGEGVIAHVNDLLDILLEILEDESTEIKLTMENVKAFILDIFMAGTDTSAITIEWTLAELINNPEVMDKARQEINSVMLDLNRLIEESDIPNLPYLQAIVKETLRIHPTAPILGRKSFESCFVYGYEIPANTNLFVNLWSMGRDPKLWENPLEFRPERFMNEDNKFDVRGQNFQFMPFGTGRRACPGASLALQVVPTNLANMIQCFEWKVDGDGVVSMEEKAAMTLPRAHPLMCVPIPRFNRIPSGVN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01927 516 Pfam Cytochrome P450 37 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Tsu01g01927 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 512 - -
Tsu01g01927 516 Gene3D Cytochrome P450 22 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 Coils Coil 335 355 - -
Tsu01g01927 516 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 512 - -
Tsu01g01927 516 SUPERFAMILY Cytochrome P450 37 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01927 516 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01927 Tsu-Chr1 19477163 19481110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01927 11 507 Cytochrome P450 AT5G06900 49.900 3.82e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01927 K24188 - gmx:100805931 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01927 01 19477163 19481110 Tsu01g01927 01 19477163 19481110 ECH