Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01925 ATGAAGAAACTTTGCATGTCAGAGTTTCTTAATGGAAAGATGCTTGATCAACTTCTTCCCATAAGAAAAGATGAGATAAACAGATTTTTGCAGATGATAGTGAAAAAAAGTGAAGCAAATGAGGCTGTGAATGTTACTGATGAGCTTTtgaaactaacaaatagtatagTGATGAGAATGTCTATAGGAAAAAGCTGTttcaaagaagatgatgaagctTATAAGGTGACTGAAAGGGTGAGAGAATCTGCTATGGTTAGTGGAATGTTTAATTTGGCtgattatttttggttttgtaagAGATTGGATATTCAAGGAATAAAGAAAAGGTTAAAGGATGTTCATGGTAGGTTTGATAACATGATGGAAAGTATTATCAAGGAGCATGAAGATGGTAGAAGTAAATTAGAAAGAAAGGATGGTGCAAAGGATGTATTAGATGCTCTTTTGAATATTTATGAAGATCAAAACTCGGAGATCAGAATAACTAGAGATAACATCAAAGCCTTCTTGGTGGATATGTTCACAGGTGGGACAGATACAACAGCTGTTACTCTAGAATGGTCATTAGCAGAACTAATTAACCATCCAACTATTATGGAAAAAGCAAGGAAAGAAATTGACTCAATGATTAGAAAGGATAGAATAGTAAAAGAATCAGATATATCTTATCTTCCTTATCTCCAAGCCATAGTGAAGGAAACACTAAGACTTCACCCTCCATCTCCATTTATATTGAGGGAATCAACAGAAAACTGCACAATTTCTGGATATGATATCCCAACCAAAACACAAATTTTCACCAATATTTGGGCTATTGGAAAGGATCCAAAGCATTGGGATAAACCTCTTGAATTTATGCCGGAAAGGTTTCTTATTaatgatgaaaatggaaaagaGAGTCCTGCTGTTGAAGTTAGGGGACAAAATTATGAGCTTATGCCTTTTGGAAGTGGTAGAAGAATGTGTCCTGGTACTTCACTAGCACTAAATGTTGCTCACACAACCCTTGCAAATATGATTCATTGCTTTGAATGGAAGATTGAAGATGGAGGAAAAGTTTGTGTTGACATGGATGAGGGTCCTTCATTTATTCTTTCAAGAGCTCAACCACTTATTTGCTTCCCAACACCAAGGTTAATGCCATTTCCTTCCATGTGA 1161 0.3359 MKKLCMSEFLNGKMLDQLLPIRKDEINRFLQMIVKKSEANEAVNVTDELLKLTNSIVMRMSIGKSCFKEDDEAYKVTERVRESAMVSGMFNLADYFWFCKRLDIQGIKKRLKDVHGRFDNMMESIIKEHEDGRSKLERKDGAKDVLDALLNIYEDQNSEIRITRDNIKAFLVDMFTGGTDTTAVTLEWSLAELINHPTIMEKARKEIDSMIRKDRIVKESDISYLPYLQAIVKETLRLHPPSPFILRESTENCTISGYDIPTKTQIFTNIWAIGKDPKHWDKPLEFMPERFLINDENGKESPAVEVRGQNYELMPFGSGRRMCPGTSLALNVAHTTLANMIHCFEWKIEDGGKVCVDMDEGPSFILSRAQPLICFPTPRLMPFPSM 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01925 386 PANTHER CYTOCHROME P450 93A2 1 384 - -
Tsu01g01925 386 Pfam Cytochrome P450 2 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS E-class P450 group I signature 313 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS E-class P450 group I signature 229 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS E-class P450 group I signature 186 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS E-class P450 group I signature 166 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS E-class P450 group I signature 269 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS E-class P450 group I signature 323 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 SUPERFAMILY Cytochrome P450 2 379 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 384 - -
Tsu01g01925 386 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 316 325 IPR017972 GO:0005506|GO:0016705
Tsu01g01925 386 Gene3D Cytochrome P450 1 372 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS P450 superfamily signature 323 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS P450 superfamily signature 177 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS P450 superfamily signature 230 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01925 386 PRINTS P450 superfamily signature 314 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01925 Tsu-Chr1 19427360 19429193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01925 1 379 Cytochrome P450 AT5G06900 43.570 3.47e-118 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01925 K24188 - gmx:100811919 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01925 01 19427360 19429193 Tsu01g01925 01 19427360 19429193 ECH