Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01918 ATGAGTGTTTGCTTTCCTGTTGGTCAATCTTCAATAAATGCCGTTGTTCTCAAAGGCCGTACTCGGCTGCTGATGAGCAGTAACATCTGCAGTCTTCAGACCAGAGGAACATCCTGTTCATTTTCTTCCAGTTTTTACCCTGGGAAGTCGGAGACAAATTATGTCGGTCTTTCTATTTGCGGAAAATCATCTTGTTCAACGATTATGGGCCAAACAATAAAAGGAGGTTACCTTGGATCATGCTGCTCCAAGCAAAGGGGAAGTGCTCAGGTTTTTAGTTCTGTAGTCTCTCGGAAGAGGCATAGCGAAATTTCATTTGCATGCCAGAGTATGAGTATGAGGCTGTTGGTACCTAAACATAAAATGCTTTCTAAAGTTAAATGTAATGTGGGACGAATAACTTGGCCACGCAGTTGTGCGTCTGTTGGCATGATATTTGGATTATTTGTGTGTAATTTGAATTCTGAACCTGCGCATGCTGAGACAGATTATGGAAATGAGAATAAGAATGATGCCTGCGACGAGTCAAATGTTAAAGTCTCACACGGGAAGAAAGTTTACACAAACTATTCTGTAATCGGAATACCTGGGGATGGAAGATGCATGTTCCGCTCAGTTGCTCACGGGGCTTGTTTGAGGTCAGGAAAACCGCCTCCTAGTGAAAGCTTCCAGAGAGAGCTAGCAGATGATTTACGGGCCAAGGTTGCTGATGAGTTTATTAAAAGAAGGGAAGAAACAGAATGGTTTATTGAAGGtgattttgattcatatatttCACGAATAAGGAAGCCTCATGTGTGGGGAGGTGAACCTGAATTGTTCATTGCTTCACATGTTTTGCAGATGCCAATCACTGTATACATGTATGATCAGGATGCTGGTGGATTGATATCAATAGCTGAATATGGGCAAGAATATGGCAAGGAAAATCCAATTAGAGTTCTCTACCATGGGTTTGGTCATTATGATGCATTGGAGATTCCTACAAAAAAGGGTCCTAAGTCACGGCTCTAG 1014 0.4162 MSVCFPVGQSSINAVVLKGRTRLLMSSNICSLQTRGTSCSFSSSFYPGKSETNYVGLSICGKSSCSTIMGQTIKGGYLGSCCSKQRGSAQVFSSVVSRKRHSEISFACQSMSMRLLVPKHKMLSKVKCNVGRITWPRSCASVGMIFGLFVCNLNSEPAHAETDYGNENKNDACDESNVKVSHGKKVYTNYSVIGIPGDGRCMFRSVAHGACLRSGKPPPSESFQRELADDLRAKVADEFIKRREETEWFIEGDFDSYISRIRKPHVWGGEPELFIASHVLQMPITVYMYDQDAGGLISIAEYGQEYGKENPIRVLYHGFGHYDALEIPTKKGPKSRL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01918 337 Gene3D - 171 333 - -
Tsu01g01918 337 PANTHER OTU DOMAIN CONTAINING PROTEIN 13 337 - -
Tsu01g01918 337 SUPERFAMILY Cysteine proteinases 189 325 IPR038765 -
Tsu01g01918 337 ProSiteProfiles OTU domain profile. 190 328 IPR003323 -
Tsu01g01918 337 Pfam OTU-like cysteine protease 196 322 IPR003323 -
Tsu01g01918 337 PANTHER OS09G0487700 PROTEIN 13 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01918 Tsu-Chr1 19250244 19254852 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01918 - - ccaj:109795157 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01918 01 19250244 19254852 Tsu01g01918 01 19250244 19254852 ECH
Tsu01g01918 01 19250244 19254852 Tsu07g04172 07 47402718 47409893 PCT