Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01874 ATGGAAAATTGCTGTACAAAAAATCTATGCGGTTTGTTCAAGaataaaataatggaaaaaCCCGAGAAAGACTGGCCTGAGAagataaacaacaacaacaataaattggtGGTGTTAAAAGAACCCACGGGCAGAGATATTGGGCTACGATACAAATTAGGAAAGGAACTATGGAGAGCTGAATCCGGAATAATATACGATTGCACAGACAGAGAAACAGGAGAACTCCTTTCTTGCAAGTCGATTTCGAAGGAGTATAAGCTTAGAACTGCGATTGCTATCGAAGATTTGAGAAGAGAAGTTGAAATCATGAGGCATTTACCTAATCACCCTAACATCGTTTCCTTGAAGGATACTTATGAAGACGACGATGATGTTCATCTTGTTACGGAGGAACTCTGTATCGGTCGTAACCTTCTCAATCTCATCGTCGGTAGAGGATACTACAGCGAACGCTCTGCAGCTTCCATAGTCAAAAGCATCGTCGAAGTTGTTCAGATGTGCCACAAACATGGTGTGATGTATCGGAATCTCAAACTCGAAAATTGTTTGCTTTTAAGGGAAGGAGAACCTTTGAAAGTTACTGACTTTCGTTTGTCAATTTTCTTTAAACCAGGTGAAAGATTGAATCAAAATGGTTGGAAGTTCATATTACATGGCCCCTGA 666 0.3829 MENCCTKNLCGLFKNKIMEKPEKDWPEKINNNNNKLVVLKEPTGRDIGLRYKLGKELWRAESGIIYDCTDRETGELLSCKSISKEYKLRTAIAIEDLRREVEIMRHLPNHPNIVSLKDTYEDDDDVHLVTEELCIGRNLLNLIVGRGYYSERSAASIVKSIVEVVQMCHKHGVMYRNLKLENCLLLREGEPLKVTDFRLSIFFKPGERLNQNGWKFILHGP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01874 221 ProSiteProfiles Protein kinase domain profile. 51 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01874 221 Gene3D Phosphorylase Kinase; domain 1 40 133 - -
Tsu01g01874 221 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 211 - -
Tsu01g01874 221 SUPERFAMILY Protein kinase-like (PK-like) 48 206 IPR011009 -
Tsu01g01874 221 SMART serkin_6 51 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01874 221 Pfam Protein kinase domain 54 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01874 221 Gene3D Transferase(Phosphotransferase) domain 1 135 215 - -
Tsu01g01874 221 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 14 31 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01874 Tsu-Chr1 18807046 18813137 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01874 1 211 EF-hand Containing Proteins AT5G19450 55.708 9.42e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu01g01874 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01874 K13412 - cpap:110811275 241.121