Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01870 atgGAAAATCTATGTGGCGTGTTCAAGAAGTCAAAACGAAATGAAAAACCCGGTGAATACTGCCCTGAGAagataaacaacaacaataccAAAACATTGGTGGTGTTGAAAGAGTCCACGGGCCGAGAGATAGGACTACGATACGAATTAGGGAGAGAATTAGGGAGAAATGAATTCGGAATAACGTATTTATGCAAAGACAGACAAACAGGGGAAGAACTTGCTTTTAAGTCGATTTCGAAAAATAAGCTTCTAACAGCGAGTAATATTGAAGATGTGAGAAGAGAAGTTGAAATAATGAGATATTTACCTGAACATCCTAACATCGTTTCGTTGAAGTATACTTATGAAGATGACGATCATGTTCATCTTCTTATGGAACACAGTAAAGGTGGTGGTGACCTTCTTGATCGCATCATCTAG 423 0.3664 MENLCGVFKKSKRNEKPGEYCPEKINNNNTKTLVVLKESTGREIGLRYELGRELGRNEFGITYLCKDRQTGEELAFKSISKNKLLTASNIEDVRREVEIMRYLPEHPNIVSLKYTYEDDDHVHLLMEHSKGGGDLLDRII 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01870 140 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 14 23 140 - -
Tsu01g01870 140 Gene3D Phosphorylase Kinase; domain 1 35 129 - -
Tsu01g01870 140 Pfam Protein kinase domain 48 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01870 140 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 140 - -
Tsu01g01870 140 SUPERFAMILY Protein kinase-like (PK-like) 47 139 IPR011009 -
Tsu01g01870 140 ProSiteProfiles Protein kinase domain profile. 48 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01870 Tsu-Chr1 18790217 18790639 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01870 9 140 EF-hand Containing Proteins AT5G19450 57.778 3.36e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu01g01870 Pkinase 7.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01870 K13412 - gmx:100815320 167.548