Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01866 ATGTTCTTTCAACCAGGTGAAAGATTGAATCAGATAGTTGGAAACCTATATTACATGGCCCCTGAAGTATTAAATCGAAGTTATGGCCCTGAAATTGATATCTGGAGTGCTGGAGTCACTCTTTACATCTTACTTTGTGGTTTCCCTCCGTTTTGGGCAGAAACTGGGCAGGGAGTTGCTAAAGCAATTACACAATCTGTTATTGACTTTAATACGAAGCCATGGCCAAAGGTTTCTCATAATGCAAAAGACCTTGTTAAAAAGATGCTTGATCCCGACCCAAAGCTCCGGCTTACTGCACAGGAAGTGTTAGATCATCCATGGTTGATCCGTAACCTTGTTATGAAGGAACCCGATACGGAAAAAGACCTTGTTAAGAAGATGGTTACTGCACATGAAGTGTTTGATCATCATCCATGGTTGCAGAATGCAAAGACAGCTCCTAATGTTTCATTGGGAGAAAAAGTCAGAGAAAAGCTCTTGATACTTTCTGCTATGAACCGACTTACGATAACAACATCGAGTGTGATTGCACAACATTTGAATGATGAAGAATTATGGGTGAGGGATACAGGAATTAAAGGCCAAAATAACCACGATGAAGTACGACTAAGATTGTATAGGCTAGGCCAAGAATATCCTGATGTAGATGTGCAAAGACTTGTTGACGCATTTGATGGAGCCAAAGAGGGTTACCTAAATTACAAATCGGAGTTTTAA 720 0.4028 MFFQPGERLNQIVGNLYYMAPEVLNRSYGPEIDIWSAGVTLYILLCGFPPFWAETGQGVAKAITQSVIDFNTKPWPKVSHNAKDLVKKMLDPDPKLRLTAQEVLDHPWLIRNLVMKEPDTEKDLVKKMVTAHEVFDHHPWLQNAKTAPNVSLGEKVREKLLILSAMNRLTITTSSVIAQHLNDEELWVRDTGIKGQNNHDEVRLRLYRLGQEYPDVDVQRLVDAFDGAKEGYLNYKSEF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01866 239 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01866 239 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 2 110 - -
Tsu01g01866 239 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 119 236 - -
Tsu01g01866 239 SMART serkin_6 2 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01866 239 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 110 - -
Tsu01g01866 239 PANTHER SERINE/THREONINE-PROTEIN KINASE 119 236 - -
Tsu01g01866 239 Gene3D Transferase(Phosphotransferase) domain 1 1 185 - -
Tsu01g01866 239 SUPERFAMILY Protein kinase-like (PK-like) 3 135 IPR011009 -
Tsu01g01866 239 Pfam Protein kinase domain 5 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01866 Tsu-Chr1 18728288 18730450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01866 1 224 EF-hand Containing Proteins AT3G57530 54.113 5.26e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu01g01866 Pkinase 3.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01866 K13412 - pop:7468973 254.603