Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01825 atggagtCAGTGATGGGAGTGACGGAGACGAGTAGCGGTAAGATGTTCGGAGGTTACAATAAGAGATACAAACATTACGGTCAAAGTCTTGGCTGTTCAATGAACTTTCACATTTACTTCCCTCCCAATTCCAATTCTGATAATAAACCATTCCCTGTTCTCTATTGGCTCTCCGGTCTCACTAACTCCGACGAGAATTTCATTATCAAGTCCGGTGCTCAACGCACTGCCTCCCAACACGGCGTTGCCTTGATCGCCCCCGACACTTCTCCAAGAGGGTTGAATGTTGAAGGAGAATCCGATTCGTGGGACTTTGGTGTAGGTGCGGGATTTTATCTCAACGCTACACAACAGAAATGGAAGAATTGGCGCATGTATGATTATGTTGTGAAGGAATTGCCAGAGCTTCTAACAGATAACTTTCCACAGCTAGACACATCAAATGCTTCAATATTTGGCCATTCTATGGGTGGGCATGGTGCACTAACTATCTACCTAAAAAATATGGATAAATATAAGTCAGTTTCTGCCTTTGCACCAATAGCAAATCCTACAAATTGTCCTTGGGGACAGAAGGCATTCGCCAATTATCTAGGCGGCAATAAATCTGATTGGGAGGATTACGACGCCACTTATTTGGTGACAAAGCGTCCCAATGTATCTACCACCATTTTGATTGATCAGGGGGAAGATGACAAATATTTGCATGATCAACTGCTTACTCACAAGTTTGAAGAGGCATGCAAGAATGGCAATGTTCCGCTGTTGTTACGTCTTCAACCTGGTTATGATCACTCCTACAATTTTATTACCACCTTCATTGATGATCACATCAAGCATCATGCTCAAGCTCTTAAGGCTTAA 864 0.4271 MESVMGVTETSSGKMFGGYNKRYKHYGQSLGCSMNFHIYFPPNSNSDNKPFPVLYWLSGLTNSDENFIIKSGAQRTASQHGVALIAPDTSPRGLNVEGESDSWDFGVGAGFYLNATQQKWKNWRMYDYVVKELPELLTDNFPQLDTSNASIFGHSMGGHGALTIYLKNMDKYKSVSAFAPIANPTNCPWGQKAFANYLGGNKSDWEDYDATYLVTKRPNVSTTILIDQGEDDKYLHDQLLTHKFEEACKNGNVPLLLRLQPGYDHSYNFITTFIDDHIKHHAQALKA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01825 287 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 6 286 - -
Tsu01g01825 287 SUPERFAMILY alpha/beta-Hydrolases 10 286 IPR029058 -
Tsu01g01825 287 Gene3D alpha/beta hydrolase 8 286 IPR029058 -
Tsu01g01825 287 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 6 286 IPR014186 GO:0018738|GO:0046294
Tsu01g01825 287 Pfam Putative esterase 28 279 IPR000801 -
Tsu01g01825 287 TIGRFAM fghA_ester_D: S-formylglutathione hydrolase 11 285 IPR014186 GO:0018738|GO:0046294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01825 Tsu-Chr1 18328995 18331197 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01825 6 286 Carbohydrate Esterase AT2G41530 75.801 7.43e-165 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01825 K01070 - gmx:100796669 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01825 01 18328995 18331197 Tsu01g01825 01 18328995 18331197 ECH