Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01781 ATGGCAAAGAGGAAGAGCTTGTTTGGATGGGTGAAAAGTCTTTTCATTTCTGAGTTAAAGGACAAAAAGCAAAAGAAATGGATATGGAGATTAGGAAGGATTAAACAGAAGCAATATCCTACAATTACAGCTTCAAACAAGACATTGATTGAAGAAGCAAGTGCGGAGCAGAGAAAACATGCTTTAGCTGTGGCTATTGCAACAGCTGCTGCTGCAGAGGCTGCAATTGCTGCTGCACATGCTGCTGCTGAGGTTGTTAAGCTCACAGATGGCACGTCTCGTTCGTATTCATATCTCTCTAAGGGTGACAGAAGTTTTGCTGCCATCAAGATTCAAAGCGCTTACCGCGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTATAAGACTACAGGCCATAATTCGCGGAGAAGCAGTTAGGCGTCAAGTGTCGAGAACATCAAAGAATGTTCCCTCTTATGCAAAAAATCGGAAGGAAATCCAGGAAAGAAGCAGCCACACTGAGGAAGAAAACTACAAAAATGACCATATAAAACAGTTTCCAAAGCAAAAGAAAAGCATAGAAGAAAATGAACTTAAGggaaAGTCCGCATTGCATTTGAGGAGTCCTAGTGTCATATCCGCTCAAAATGTTTTGCAGCCTGAATGTGATAGTCACAGAACTTGGAATTATAGCTCTTACTCAAGAGAAGACATTGAAGCCATATGGTTAAGAAAGCAAGAAGCTATTGTCAAAAGAGATAGGATGAGGCAATACTCTTCTTCGCAAAAGgaGAGAACATTTTCCCAAAGGGTGGAAGAGTCTCTGCAGAAAGAATTTGGAGATAGTTGCCATACTCTAGGAGAGTGGCTACAAAAAGAAACATGTAACTGGAATGATCCTTCAAATATCACAATAAGAAATGAAGTGCAAGAAGCATTAAGATCACAAATTTCAGTCCAAAGAAAATCATTTTCTCATGTGAAAAGAAGTTCAATTGGAGATGAGTGTACCATGCCAAATTCTCCAGTTTTTCCTAAATACATGGCTGTTACTGAATCTAGTAAAGCAAAAGTAAGGTCTATGAGCACACCAAGGCTAAGAACATGA 1098 0.3962 MAKRKSLFGWVKSLFISELKDKKQKKWIWRLGRIKQKQYPTITASNKTLIEEASAEQRKHALAVAIATAAAAEAAIAAAHAAAEVVKLTDGTSRSYSYLSKGDRSFAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGEAVRRQVSRTSKNVPSYAKNRKEIQERSSHTEEENYKNDHIKQFPKQKKSIEENELKGKSALHLRSPSVISAQNVLQPECDSHRTWNYSSYSREDIEAIWLRKQEAIVKRDRMRQYSSSQKERTFSQRVEESLQKEFGDSCHTLGEWLQKETCNWNDPSNITIRNEVQEALRSQISVQRKSFSHVKRSSIGDECTMPNSPVFPKYMAVTESSKAKVRSMSTPRLRT 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01781 365 Gene3D - 104 153 - -
Tsu01g01781 365 PANTHER IQ-DOMAIN 5-RELATED 1 364 - -
Tsu01g01781 365 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Tsu01g01781 365 MobiDBLite consensus disorder prediction 147 197 - -
Tsu01g01781 365 PANTHER IQ-DOMAIN 12 1 364 - -
Tsu01g01781 365 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Tsu01g01781 365 MobiDBLite consensus disorder prediction 158 197 - -
Tsu01g01781 365 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Tsu01g01781 365 Pfam Protein of unknown function (DUF4005) 335 364 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01781 Tsu-Chr1 17836664 17839634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01781 1 365 IQD Protein Family AT5G03960 41.146 8.70e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01781 - - cam:101513369 495.352