Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01760 ATGAGTAGGCATTATACAACTATTGAGTTTAACATGAGCCTTTCATTCAAAGCTATTAGACGGGCTTCATTTAGCAGTAGCCAAACATCATCTAAAGTATCAAATATCCCAAAGGGCTATCTTGCAGTGTACGTTGGAGAGGAAATGAAGCGGTTTGTTGTCCCCTTGTCATACTTGAACCAACCTTCATTTCAAGACTTGCTGAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGCACAGAAGATGATTTTTTGCATATTACGTCTCGTTTCAATGAGCTATAA 312 0.3878 MSRHYTTIEFNMSLSFKAIRRASFSSSQTSSKVSNIPKGYLAVYVGEEMKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDDFLHITSRFNEL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01760 103 Pfam Auxin responsive protein 20 98 IPR003676 GO:0009733
Tsu01g01760 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 16 101 - -
Tsu01g01760 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 16 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01760 Tsu-Chr1 17621368 17621946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01760 14 96 Calmodulin-binding Proteins AT3G43120 42.169 8.22e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01760 K14488 - gmx:112998546 137.502