Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01758 atgGGTTTTCGCTTACCCGGTATTAGACGATCATCATTTAGTACAAGTCAATCATCTAGGAAGGAAATGGAAGTCCCAAAAGGTTATCTTGCAGTGTATGTTGGACCTAAAATGAATAGGTTCTTGATTCCAGTATCATTCTTGAATGAGCCTTTATTTCAAGAATTGCTTAGCCAATCTGAACAGGAATTTGGTTACAGTCATCCAATGGGTGGTCTTACAATTCCCTGCAATGAAGATGTCTTCTTACATACGGCTTCTCGCTTGAACAACTTGTAA 279 0.3835 MGFRLPGIRRSSFSTSQSSRKEMEVPKGYLAVYVGPKMNRFLIPVSFLNEPLFQELLSQSEQEFGYSHPMGGLTIPCNEDVFLHTASRLNNL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01758 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Tsu01g01758 92 MobiDBLite consensus disorder prediction 1 22 - -
Tsu01g01758 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Tsu01g01758 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01758 Tsu-Chr1 17615583 17615861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01758 14 91 Calmodulin-binding Proteins AT3G43120 47.436 9.05e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01758 K14488 - gmx:100500615 147.902