Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01756 atggGTTTTCGCTTACCTGGTATTAGACGATCATCATCTAGCAAACAAGTGGAAGTGTCAAAAGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGAGGTTCTTGATTCCAATATCATTCTTGAATGAGCCTTTGTTTCAAGAATTGCTTAGCCAAGCTGAAGAGGAATTCGGTTACTGTCATCCAATGGGTGGTCTTACAATTCCCTGCAAGGAAGATGTCTTCTTACATACAACTTCTTGCTTGAACGGCTTGTCTGTCAGATCAGGGAAAGTGGAGCCTAGCTGCGGTGATTCGAGCAGATGGTTTGGTATCAGCTACTGGTTGTCGGTGTTTGCAAATTTTCCACGACTTTATGTTGCAGTATCGATGGCTTTGATGAAAGGTTTGGATTTTTCTGGATTTGTTGTTTTATCTCTTCAGTCAAAATCTGGCTTTGATGTAACGTGA 453 0.4084 MGFRLPGIRRSSSSKQVEVSKGYLAVYVGEKMKRFLIPISFLNEPLFQELLSQAEEEFGYCHPMGGLTIPCKEDVFLHTTSCLNGLSVRSGKVEPSCGDSSRWFGISYWLSVFANFPRLYVAVSMALMKGLDFSGFVVLSLQSKSGFDVT 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01756 150 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 84 IPR003676 GO:0009733
Tsu01g01756 150 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 11 84 - -
Tsu01g01756 150 Pfam Auxin responsive protein 12 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01756 Tsu-Chr1 17612192 17613691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01756 18 85 Calmodulin-binding Proteins AT3G43120 50.000 8.92e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01756 K14488 - gmx:100500615 145.976