Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01750 ATGGAGCAAAAAGTATTTTCATCTTTGCTTGTATACAAACATTTTAAGCCACATTTGATCATGGTATTAGGCCAGTTGGGATATACTTTGTTATATTTTGTTACTGAAGCTTCCTTCAATCATGGAATGAGTCCTTATGTGTATGTTACTTATCGTCATGTTGTGGCTGCCTTTGTCATGTTTCCTTTTGCATACTTTCTTGAGAGAAATGTAAGACCCAAGCTAACATTTGCTCTTTTTATGGAATTTTTTGTGCTTTCAGTGTTAGGAGTCAGTTTAACTCTGAATATGTACTTTGCAAGCTTGAAGTTCACTTCTCCAACCTTTATTGCTTCCATGGTGAACAGCATAGCTGCCCTTACCTTCATTATTGCAGTGGCACTCAGGTTTGAGGTTCTTGATCTTGGAAGTCCTCATGGTATAGCAAAAGTCCTTGGTACCATAATCTCCTTAGCAGGTGTTATGACAATGACACTATACAAAGGACCTATTATGAGTAATTTATGGCGTCCTCTAATTAATATTCAACCCGTAAGTGCTTCTGCCAATGAGAAGAGCGAGTTAAAGGGTTCACTTCTTACGGTTTTATGCTGTATTACTTGGTCCATATCGTTCATTATGCAGGCATCGACGCTAAAAAGATACCCTGCTCAATTATCACTCACTACATGGATGTGCTTCATTGGAGCAGCACAATCAGCTGTTTTCACAGTGATAGCAGAATATAATAACCCTTCAGCATGGGGTATAGGACTCAACATTGAATTGTGGTCAACAATATATGGGGGAATTGTTGTTAGCGGTTTGTTGACATACATTCAACTATGGTGCACAGAGAAAAAAGGACCAGTTTTTGTCACATTGTTTAACCctcttagtaccatatttgtGGCAATTCTGGCATACTCAGTCCTTGGTGAAAAACTTTATTTGGGCAGCATCATAGGTGCATTTATTGTCATCATAGGTTTGTACATGTTGCTGTGGGGGAAAGAATATGACATAGAGGTTGATTTCAAGACCAAAGATAAATTGCAGTGCTATAGTGAAGACAAAGAATGCAGAATATAG 1071 0.3763 MEQKVFSSLLVYKHFKPHLIMVLGQLGYTLLYFVTEASFNHGMSPYVYVTYRHVVAAFVMFPFAYFLERNVRPKLTFALFMEFFVLSVLGVSLTLNMYFASLKFTSPTFIASMVNSIAALTFIIAVALRFEVLDLGSPHGIAKVLGTIISLAGVMTMTLYKGPIMSNLWRPLINIQPVSASANEKSELKGSLLTVLCCITWSISFIMQASTLKRYPAQLSLTTWMCFIGAAQSAVFTVIAEYNNPSAWGIGLNIELWSTIYGGIVVSGLLTYIQLWCTEKKGPVFVTLFNPLSTIFVAILAYSVLGEKLYLGSIIGAFIVIIGLYMLLWGKEYDIEVDFKTKDKLQCYSEDKECRI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01750 356 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Tsu01g01750 356 Pfam EamA-like transporter family 33 157 IPR000620 GO:0016020|GO:0016021
Tsu01g01750 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Tsu01g01750 356 PANTHER WAT1-RELATED PROTEIN 15 345 - -
Tsu01g01750 356 PANTHER WAT1-RELATED PROTEIN 15 345 IPR030184 GO:0016021|GO:0022857
Tsu01g01750 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01750 Tsu-Chr1 17555853 17558329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01750 16 355 Nodulin-like Gene Family AT5G07050 42.898 6.22e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01750 - - gmx:100527877 550.821