Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01735 ATGGAGGAGGTTCCGGTTCTGGTTTTCGTTTCACTTTTGGTTCCGGTTCCGGTTCCGATTTCAGACGCTTCCCTCTATCGTCGAGGCTTTCCGAAGGAGGAGGTATTGGAGATGGGAATTATTGTTCACTCTGTTATAATTGGAATTTCTCTTGGTGCTTCAGACAGTCCAAAAACCATAAGGCCTCTAGTAGCTGCATTGACTTTTCATCAATTCTTTGAAGGCATGGGACTTGGAAGTTGTATAACTCATGCAAATTTCAAGAATCTATCAATTACACTAAGAGGATTATCCTTTGCTTTAACAACTCCAGCTGGGATTGGAATTGGTATAGCGATAAGTAGTGTTTACGACGAGAACAGTCCAACCGCCCTTATTGTCGAAGGAGTCTTCAATGCAGCTTCAGCTGGAATTTTAATCTATATGGCACTTGTTGATCTTCTTGCTGCTGATTTTATGAATCCAAGAATGCAAAAGAGTGGTAGGCTTAGATTAGGATGCAATCTATCTCTTTTACTAGGAGCTGGTTGTATGTCTCTTATAGCCAAATGGGCTTAG 558 0.414 MEEVPVLVFVSLLVPVPVPISDASLYRRGFPKEEVLEMGIIVHSVIIGISLGASDSPKTIRPLVAALTFHQFFEGMGLGSCITHANFKNLSITLRGLSFALTTPAGIGIGIAISSVYDENSPTALIVEGVFNAASAGILIYMALVDLLAADFMNPRMQKSGRLRLGCNLSLLLGAGCMSLIAKWA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01735 185 TIGRFAM zip: ZIP zinc/iron transport family 34 185 IPR004698 GO:0005385|GO:0016021|GO:0071577
Tsu01g01735 185 PANTHER ZINC/IRON TRANSPORTER 34 185 - -
Tsu01g01735 185 Pfam ZIP Zinc transporter 35 182 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tsu01g01735 185 PANTHER ZINC TRANSPORTER 1 34 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01735 Tsu-Chr1 17406329 17409694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01735 34 185 Inorganic Solute Cotransporters AT2G32270 63.816 8.82e-63 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01735 K14709 - gmx:547695 240.736