Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01730 ATGAAGAACTCTTCTTCGGATCAATGTTTTTTCATCGAGAGCGATAACGATGAAGATAAAGAGTTAGgaagagaagaaaataatgTTGGAAATGAATCAGACTTTTCATGTGACTCTAATGAGAATTTAGACCAAAGAAAACCAAGCTCCTATAGCATGGCATGGCCTCAAAGTTACAGGCAATCGATCGATCTTTATGGTAGCGTGCCATCGCCAAATATTGGATTTCTTGGCACAACATCACTGACAAGATTAGGCAGTTCTTTTCTTGGTACAACATTGACAAGGAGAAACACTGCTGAAATTATACCAACTATCAAAAAGCCTCTGATACAACCAGCAGTGGACGAAGAGCAACAGCATACTACTCAGGCATTGCTTCCTCCCCTCCCATCTAGGAAGTCTTCAGTTAGGAAGTCTTTAAAGATTTCACATGAAGTTCCTATTCCTGGCCAATGCTCTTTTGGACAAGCTGTGCTTAATGGTATGAATGCCCTTTGTGGTGTTGGAATCCTTTCGACCCcttatgctcttaatgaaggTGGATGGGCTGCACTTGGAATCTTGCTGACATTTGCAGCACTTTCCTTTTATACTGGATTGCTGTTGCGTTATTGCTTGGATAGCGAACCTGGTCTGGAAACCTATCCCGACATTGGTCAAGCAGCTTTTGGTACAATTGGACGTGTTGCCATTTCAGTAAGTCCTTTTTtgcatattattattttacaggAGGCAACCGCCGCTTGCTGCATTGAATATATCATTCTAGAAAGCGACAATCTATCATCCTTATTTCCAGATGCAAGCTTAATTTTAGGTGGATTTAAATTGAATGCACACATTCTATTTGCAATCTTGGCCACATTGGCTATTCTTCCTACCGTTTGGCTTCGGGACCTTCGCATTCTAAGTTACATATCAGGCTTAGGAGTCATTGCAACGGCTGTTGTGGTTCTTTGTTTGGTGTGGGTTGGCGTGGTAGATGATATTCCGATTAGTACAAAAGGAACAACAACACTTAAACTTTCAACATTCCCTGTTGCTATGGGTCTATGTGGTTACTGCTTCTCCGGACATGCTGTGTTCCCCAACCTATATACCGCTATGGCTAATCGAAATCAATTCCCTGCAGTACTATTGACATGTTTTGCAATTTGCACATCATTGTATTGTCTTGTAGCTGTTTTGGGATACTTAATGTTTGGAGAAGATACAGAGTCacaatatactcttaacatacCTCGAGGATTAATAGCCTACAAGATTGCGATCTGGACTACGATGAAAAATGGATGTTGTTTCTTAACCAAAAGCACATATGCTTTGAGTCTAACACCAGTAGCAATGTCTGTGGAGGAATTAATATCACCAACTAAttccaaatttaaattataCTCAATCCTCATCAGAACAGCACTAGTGATTTCTACATTGCTTGTTGGTCTTTCGGTTCCATTTTTCGGTTTGGTGATGTCGTTAATTGGGTCTTTGCTCACAATGTTTGTTTCCCTTATTCTACCAGCTGCTTGTTTCCTAAGCATCAAGGGCAGAAGACTCTCGCGCTCTCAGgTTATACTTTGTGTTACAGTGATCATAGTAGGTATTGTTTCTTCTGGTTTTGGATCATACTCAGCCATCTCGGAGATTATAGCGGAGTTGTTTCCATGA 1671 0.3902 MKNSSSDQCFFIESDNDEDKELGREENNVGNESDFSCDSNENLDQRKPSSYSMAWPQSYRQSIDLYGSVPSPNIGFLGTTSLTRLGSSFLGTTLTRRNTAEIIPTIKKPLIQPAVDEEQQHTTQALLPPLPSRKSSVRKSLKISHEVPIPGQCSFGQAVLNGMNALCGVGILSTPYALNEGGWAALGILLTFAALSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTIGRVAISVSPFLHIIILQEATAACCIEYIILESDNLSSLFPDASLILGGFKLNAHILFAILATLAILPTVWLRDLRILSYISGLGVIATAVVVLCLVWVGVVDDIPISTKGTTTLKLSTFPVAMGLCGYCFSGHAVFPNLYTAMANRNQFPAVLLTCFAICTSLYCLVAVLGYLMFGEDTESQYTLNIPRGLIAYKIAIWTTMKNGCCFLTKSTYALSLTPVAMSVEELISPTNSKFKLYSILIRTALVISTLLVGLSVPFFGLVMSLIGSLLTMFVSLILPAACFLSIKGRRLSRSQVILCVTVIIVGIVSSGFGSYSAISEIIAELFP 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01730 556 MobiDBLite consensus disorder prediction 13 28 - -
Tsu01g01730 556 MobiDBLite consensus disorder prediction 1 51 - -
Tsu01g01730 556 MobiDBLite consensus disorder prediction 29 51 - -
Tsu01g01730 556 Pfam Transmembrane amino acid transporter protein 153 547 IPR013057 -
Tsu01g01730 556 PANTHER OS05G0424000 PROTEIN-RELATED 23 553 - -
Tsu01g01730 556 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 23 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01730 Tsu-Chr1 17338545 17343192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01730 1 489 Amino Acid or Auxin Permease AAAP Family AT2G39130 60.362 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01730 K15015 - gmx:100798108 714.146