Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01722 ATGTTGGCGGTTCATGTCAAAAACCTCCAGGCTGCAAAAGAAAGAGTGTTTCATTTGGTTGAAGAAGAAAGGAGAAATGGTAAAGAAATCGAAAAAGATGTGAATAACTGGTTGGAGAAAGTGGACAAGTTAATTGAAACAGAAAATAAGCTTCAACAAGATCCTCGTCGTGCCAATGTTAGGTGCTCAACATGGGGGTTTCCCAATTTGATTTTGCGTCATCAGCTAAGTAGGAAAGCCAAAAAAATTGCAAACGAAGTTGTTCAAGTTCAAGGCAAAGGGACGTTTGATCGAGTTGGTTTCCTTCCAGCCCTAGATGGAGTAGCTTCCTCTTCCTCAACAAGAGGTGGTGAAAATTATGAGACAAGAGAGTCACTTAAGGACGATATTGTGAAGGCTTTATCAAACCCCAATTCACGTAACATTGGGATATATGGTTTGGGTGGAGTGGGTAAGACCAATCTTGTGGGAAAAGTTAAGATAATAGCAGAGCAACTTAAATTGTTTGATAAAGTGGTCAAAACAGAAGTAACTAAAAATCCAGACTTTAAAAGAATTCAAGGGGAGATTGCAGACTCGCTAGGTTTGCAATTTAACGAGGAGACAATTTTTGGAAGAGCAAATCGCCTAAGACAAAGAATCATGATGGAGAAAAGTATCCTTGTCATTCTAGATGATATATGGACAATGCTTGATTTGAAGAAAGTGGGAATCCCATTTGGTAATGAACATAATGGTTGCAAACTATTGATGACGTCTAGAAGTCAAGATGTGTTGGTGCAAATGGGTGTTCTAAAGGATTTGACTTTCAAACTTGGACTTATGAGTGAAAACGAGACATGGAACTTGTTTCAATTGAAAGCTGGGGATGTGGTTAAAGATAGCAATTTAAAAGATGTAGCAATTCAAGTTGCCCAAAAATGTGAAGGTTTGCCTCTTAGGGTAGTGACGGTGGCATGTGCAATGAGAAATAAGTGGGATGTCCAATCTTGGAAAGATGCATTAAGGAAATTACAATGTAATGATCAGATAGAGATGGACGCAAAGACTTATGATGCTTTGAATGTAAGTTACGAGTTTTTGGAGAGTGATGAAATGAGGGATCTCTTCTTACTTTCAGCATTACTATTAGGTAATGGTGAAAAGTACTTTTTAAAAGTTGCAATGGGTTTGAATATATTAAAGCATGTTAATACCATGGATGAGGCAAGAAACAAACTTCACACAATAATCACATCTTTACAGGAAACTTGTCTTCTTGATGTTAAAACAGGTGGCAATATCCAAATGCATGATATTGTTCGTGAATTTGCTACCTTCATAGCACGTAGGGACAAACATGTATTTCTAAGAAATCAATCCAATGCGGAATGGCCATCCAATGAATTTTTAAATAGGTGCATGCAGATTGTTCTACAACGGTGTCATATCCATTGTTTGTCCAAACATTAA 1452 0.3747 MLAVHVKNLQAAKERVFHLVEEERRNGKEIEKDVNNWLEKVDKLIETENKLQQDPRRANVRCSTWGFPNLILRHQLSRKAKKIANEVVQVQGKGTFDRVGFLPALDGVASSSSTRGGENYETRESLKDDIVKALSNPNSRNIGIYGLGGVGKTNLVGKVKIIAEQLKLFDKVVKTEVTKNPDFKRIQGEIADSLGLQFNEETIFGRANRLRQRIMMEKSILVILDDIWTMLDLKKVGIPFGNEHNGCKLLMTSRSQDVLVQMGVLKDLTFKLGLMSENETWNLFQLKAGDVVKDSNLKDVAIQVAQKCEGLPLRVVTVACAMRNKWDVQSWKDALRKLQCNDQIEMDAKTYDALNVSYEFLESDEMRDLFLLSALLLGNGEKYFLKVAMGLNILKHVNTMDEARNKLHTIITSLQETCLLDVKTGGNIQMHDIVREFATFIARRDKHVFLRNQSNAEWPSNEFLNRCMQIVLQRCHIHCLSKH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01722 483 PRINTS Disease resistance protein signature 214 228 - -
Tsu01g01722 483 PRINTS Disease resistance protein signature 308 322 - -
Tsu01g01722 483 PRINTS Disease resistance protein signature 141 156 - -
Tsu01g01722 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 371 IPR027417 -
Tsu01g01722 483 Pfam NB-ARC domain 124 360 IPR002182 GO:0043531
Tsu01g01722 483 Gene3D - 108 266 IPR027417 -
Tsu01g01722 483 PANTHER RPP4C3 2 480 - -
Tsu01g01722 483 Gene3D - 274 361 IPR042197 -
Tsu01g01722 483 Coils Coil 20 54 - -
Tsu01g01722 483 PANTHER - 2 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01722 Tsu-Chr1 17149260 17150711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01722 140 411 WRKY Transcription Factor Family AT5G45050 26.014 5.57e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01722 - - mtr:MTR_2g089975 657.136