Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01715 atggaaATTCTAGCTTCTTTTGTTGGACCAGTAGTAGATTATATTGTTGTTCCAATTGGACGACAAGTAAGTTACTTAATATTCTACAAAAGCAATTTCAAGAAGTTAGCAGATCATGTTGAAAACCTTGAGGCTGCAAGAAAAACAATTATCGATTtagttgaagaagaaagacGAAATggtaaaataattgaaataaatgtGGCGAACTGGTTGGAGAAAGTGAATGAGGTCACTAGAAAGGCAGACATCCTTCAAAATGATCCTCGTCGTGCCAATGTCAGGTGCTCAAGATGTTGGTTTCCCAATTTGATTTTGCGTCATCAACTAAGTAGACAATCCACAAAAATTGCAAAAGATATGCTTCAAGTTCAAGGCAAAGGGAAGTTTGATCGAGTTGCTTACCGACCCATCCTAGATGGAGCATTCTCCTCCTCAATTACAAGAGGTGGTGAATGTTATGAGACAAGGGAGTCACTTAAGGAGGACATTCTGAAGGCTTTAGTTGACCTTAAGTCATCCAACATTGGGGTCTATGGGTTGGGCGGGGTGGGTAAGACCACTCTGGTGAAAGAAGTTGCTCTCATAGCAATGGaacaaaaattgtttgatataGCGGTTATAACACATGTCTCCGAAAATCCAGACATTAAAACCATTCAAGGGGAGATTGCAGATTTTTTGGGTTTGCAATTCGATGAGGAGACATCTTTTGGAAGAGCAACTCGCCTAAGACAAAGAATCAAGATGGAGAAAAGTATCCTTGTCATTCTAGATAATATGTGGACCATGCTTGATTTGAAGAAAGTTGGAATTCCATTTGGTAATGAACATAATGGTTGCAAATTATTGATGACATGTAGAAATCAAGATGTGTTGCTGAAAATGAATGTTCCAAATGATTTCACTTTTAAACTTGAACTTCTGAGTGAAAACGAGACATGGAACTTGTTTCAATTTATGGCTGGGGATGTGGTTAAAGATATTAATTTGAAAGATGTAGCATTTCAAGTTGCCCAGAAATGTGAAGGTCTACCTCTCAGAGTAGTGACGGTAGCACGTGCAATGAAAAATAGGAGGGATGTCAAATATTGGGAATATGCATTACGGAAATTACAAAGTAATGATGGTTTAGAGATGGATGCAAAAACTAATTCTGCTCTGGAATTAAGTTACGATTCATTAGAGAGTGATGAAATGAGGGATCTATTCTTACTCTTTTCATTCCTCCTAGGTAATGAGGCAGAGTTCTTTTTTAAAGTTGCAATGggtttgaaaatattaaagCATCATAATACCATGGATGATGCAAGAAACAAATTTTACACAATAATCAAATCTTTGGAGGCGACTTGTCTTTTGCTTGAAGTTAAAACAAGTGGAAAAATCCAAATGCACGATTTCGTTCGTGATTTTGCTACCTCTTTAGCATGTCGGGACAAACATGTATTTCTAAGTAAAAAACCAAATGAGGATTGGCCAaccaatgattttttaaaaaggtGCACACAGATCGTCCTAAATTACTTTCCTATCCACAGTCTTCCTCAAACGTTTAATTGTCCAAACATCAAGTTTTTCTGTTTAGGAAGTGTTAACCGTTCTTTAGAAATTCCAGGTGATTTTTTTGAGGGTATGAGAAGCCTTACAACGCTAGATTTAGGGTGCTTGAACTTGTCTTCATTACCCACATCAGTTCGATTCCTAACTGAACTTAAAATGATGTGTTTGTATAAATCTGTTTTGGAAAATATGGATGCAATTGAAGCTTTGCAAAATTTAGAAATTCTTTATTTGTGGAAATGTTCAATGATCAATTTGCCAAGAGAAATAGGGAAATTGAATAAATTGAGAATGCTTGATTTGACCAATTCAGGAATTGAAGTATTCCCATCCAACATCATATCTAGTTTGACTAAGTTGGAAGAGTTGTATATGGGTGATACCTCTATTAATTGGGAAAAGGGGAATTCAACGGATAACAACGGAAATGCTAGCATTGTTGAACTTCATAAACTACCCAACTTGACTGCCCTTGAATTACAAATCCGAGAGAGTTGGATGTTGCCAACGGATTTGCAATTGATGTTTGAGAAGTTgaactattttaaaatagttattGGAGATGTATGGGAATGGGCTGACATTAAGGATGGAACCTTAAAAACATTGATGCTCAAACTTGGTACCAGCATAGATTTACAGCACGGAATTAAAGCATTGATTAAAGGTGTTGAAAATTTGTACTTGGATGATGTAGATGGAATTCAAAATGTGCTTTATCAGCTAAATGGGGAAGGATTTCCATTGTTGAAACATCTTCACGTCCAACATAATGCAAACATGAAGCACATTGTTGACTCAAAAGACAGAATTCAAATCCATGTGTCTTTTCCCGCCTTGGAAACACTAGTACTTCACAATCTTAGAAACTTGGAGCATATATGTCATGGTCCACTTTCAATTACTTCTTTTGGAAGTCTTAGTGTTATCAAAGTCAAAAATTGCATCcaattaaaatatcttttgtcCTATACAATGGTTAAAGGACTTCCCCAGCTTTCAGAAATTGAAGTCTGCCACTGCAATAATATGAAGGAGATAGTGCTCAAAGACAACAATTCAAGTGCAAATAATGATATAGCTaatgaaaaaattgactttCTTCTATTGCGTTCTTTGACTTTAGAACATTTGGAGACAATTGATGATTTCTTCTCTTCGACGAATTCCAGAAGTAAGCAAAAATATCATGGTTTAGAGCCTTATGTTTCTGCCCCATTTTTCAATGCTCAgGTTGTATTTCCTAGACTGGATACCCTAAAATTGAGCTCACTCctcaatttgaataaaatttgggATGACAATTATGATTCTATGCACAACTTGACTAGCTTGATTGTGGATAATTGCGGCGGGTTGAAGTACTTATTCTCATCCACTGGGGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTAATTGTGCAATGATGGAGGAGATTATAGCTAAGGAAAACGGAAACGGTGCATCAGAAGAGGTTGCATTTCCTAAATTGGATGCCCTCAAATTGAGCTCACTCctcaatttgaataaaatttgggATGGCAATTATGATTCTATGCACAACTTGACTAGCTTGATTGTGGATAATTGTGGCGGGTTGAAGTACTTATTCTCTTCTACTGAGGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTAATTGTGCAATGATGGAGGAGATTATAACTACAGAAGAGGGAAACGGTGCATCAGAAGAGGTTCAGTTTTGCAAATTAGAGAAAATCATATTGAAGGACATGGACAGTTTGAAGACAATATGGCGCCGCCAATTTGAAACATTGAAGAAGTTGCATGTGAACAACTGTAATAAGATTGTGGTGGTTTTTCCCTCTTCAAtgcaaaaaacatataataagcTAGAGATGTTGGAGGTTACAAATTGTGGTTTAGTGgaagaaatatttgaaattgaattgacctCCACAGAAAGTAGCAGCGTAGGAGATACAACATATTTGAAAGAAGTTACTATAGTTGGATTGGACAAGCTGAAAAATATATGGAGTCGGGATCCTGAAGGAATTCTTAGTTTTCAAAATCTAATAAATGTAAAAGCAACAAGTTGTGTAAGTTTGGAGTATCTATTACCACTTTCCGTAGCCACTCGTTGCACAAATCTCAAGGAACTTCATATAAAACAATGTCTTTACATGAAGGAAATTGTTGCTGAGGAAAAAGAATCTAGCGTGAAAGCAGCTCCCAGGTTTGAGTTTAATCAACTGAGTTCTTTATTTCTTTGGAACTTACTTAGACTCAAGGGTTTCTTTGCTAAAGAGCATACCGTAGATTGTCAATCTTTGAAGATAATTAATGTTTTCAATTGTCCAAAGTTGACTTTGTACAGAACTCTATCTGACAAAAACTCTGTTTCAACGCAACAGCCACCTTTCATTATCGACACGGTGATTCCAAATTTGGAGCAGTTGAGAATAACTAGTAAGGATGCTAACACGATATTGCAAGCCCAAAACTTAAGTTCCCTATTCCCAGAAATGACATTTCTTGGTTTGTCTGCATATACGAATGAAGTTGCATTTCCTTATTGGTTTTTTGAAAATGCGCGTCGTCTTGAAAAACTAGTTATTGAATCGAGTTGCTTCGAGAAGATATTTCAAGATGAAGGACAAATTAGGGAGAAGACtcaaacacaaatcaaaaagTTGATATTGAGTGTATTACCTAACCTTGAACATATATGTGAGGAAGGATTTCGAATTGATTCAGTTCTTGAGTTGCTTGAACACTTAGAGGTTGCATTTggtaaattcaaatatttggcCTTATCAGACTACCCTGAGATGAAGGATCTTGAACATCTTGAAATGCTTGTGATAGACTCTTGTAGAGTTGAGCAAATTGTAGCAATGGAAGAAGgatcattgaaaatcaattttaattttcccCAATTGAAAATTATGAAACTGTTCTGTTTGACAAATCTTAAGAGTTTCTATCAAGGAAAGCATATTTTAGAGTGCCCTTCATTGGAGATTTTGAATGTATGTGGTTGTAAAGCATTAAAAATGTTTTCCTTCAGCCAAATGGACACAGATGCTCTGTTTTCAATTGACAAGTTGAGCCCTAATTTGGAGCAATTGACAATAAATGGCACGGATATGTCGGGGATATTGAAACGAGGAGAAAATATCTTTGATAAAGTTGAATTTCTTTGTTTCCAATGCTTCGAAGAAACTCCAACTGTTTTTCTAGATGAGTATTTTTACACAATTTTTCCTAAtcttaaaatatttcaaatgagTAGTAGTTCTTTTGAAATGTTGTTCCCCACTACTGGTCATCTCGATATActaatttcaaagaaaataaagaatttgtTGCTTTGTGAATTGGAAAATCTCAAGCACATCTGCCAAGAAGACTTTCCGTTAGAAGATCTTAAGGAATTAGTTGTACGTAATTGTCCGAGTTTGATAAGCTTGGTACCATCGTCGACATCTTTCACAAATTTAATCCATTTGTGGGTGGGCAATTGCAAAGAGCTGAATTACTTGATAACACCTTCAACAGCTAAAAGCTTAATTCAACTCAGAACATTAAAGATAAAGAATTGTGAGAAGATGTTGGATGTTGTGAAGATTGATGAAAAAGCAGAGGAAGTCATCatatttgaaaacttggaaaTCTTGGGTTTCACTAATTTGCCAAGTTTGGGAAGCTTCTGTTGTGGGAATCAACCATTCATATTCCCATCTTTGCAATCTCTCACTGCTCAAGAATGCCCTCGAATGGAGATCTTCTCATCAGGAGTCATAGTTGCACCATATGTGACACAAATTGAAGTGGGAGAAGGAACTATTCAATGGAAAGGTGACATTAACACAACTATTCAACATTTATTCCTAGAAAAGGTACACAATATCAAGGCTGACAATATTAATTTAGTGCATGATTGGAAATTGACTTTGAAATTAACCGTAGAATAA 5541 0.3418 MEILASFVGPVVDYIVVPIGRQVSYLIFYKSNFKKLADHVENLEAARKTIIDLVEEERRNGKIIEINVANWLEKVNEVTRKADILQNDPRRANVRCSRCWFPNLILRHQLSRQSTKIAKDMLQVQGKGKFDRVAYRPILDGAFSSSITRGGECYETRESLKEDILKALVDLKSSNIGVYGLGGVGKTTLVKEVALIAMEQKLFDIAVITHVSENPDIKTIQGEIADFLGLQFDEETSFGRATRLRQRIKMEKSILVILDNMWTMLDLKKVGIPFGNEHNGCKLLMTCRNQDVLLKMNVPNDFTFKLELLSENETWNLFQFMAGDVVKDINLKDVAFQVAQKCEGLPLRVVTVARAMKNRRDVKYWEYALRKLQSNDGLEMDAKTNSALELSYDSLESDEMRDLFLLFSFLLGNEAEFFFKVAMGLKILKHHNTMDDARNKFYTIIKSLEATCLLLEVKTSGKIQMHDFVRDFATSLACRDKHVFLSKKPNEDWPTNDFLKRCTQIVLNYFPIHSLPQTFNCPNIKFFCLGSVNRSLEIPGDFFEGMRSLTTLDLGCLNLSSLPTSVRFLTELKMMCLYKSVLENMDAIEALQNLEILYLWKCSMINLPREIGKLNKLRMLDLTNSGIEVFPSNIISSLTKLEELYMGDTSINWEKGNSTDNNGNASIVELHKLPNLTALELQIRESWMLPTDLQLMFEKLNYFKIVIGDVWEWADIKDGTLKTLMLKLGTSIDLQHGIKALIKGVENLYLDDVDGIQNVLYQLNGEGFPLLKHLHVQHNANMKHIVDSKDRIQIHVSFPALETLVLHNLRNLEHICHGPLSITSFGSLSVIKVKNCIQLKYLLSYTMVKGLPQLSEIEVCHCNNMKEIVLKDNNSSANNDIANEKIDFLLLRSLTLEHLETIDDFFSSTNSRSKQKYHGLEPYVSAPFFNAQVVFPRLDTLKLSSLLNLNKIWDDNYDSMHNLTSLIVDNCGGLKYLFSSTGVGSFKNLKHLEISNCAMMEEIIAKENGNGASEEVAFPKLDALKLSSLLNLNKIWDGNYDSMHNLTSLIVDNCGGLKYLFSSTEVGSFKNLKHLEISNCAMMEEIITTEEGNGASEEVQFCKLEKIILKDMDSLKTIWRRQFETLKKLHVNNCNKIVVVFPSSMQKTYNKLEMLEVTNCGLVEEIFEIELTSTESSSVGDTTYLKEVTIVGLDKLKNIWSRDPEGILSFQNLINVKATSCVSLEYLLPLSVATRCTNLKELHIKQCLYMKEIVAEEKESSVKAAPRFEFNQLSSLFLWNLLRLKGFFAKEHTVDCQSLKIINVFNCPKLTLYRTLSDKNSVSTQQPPFIIDTVIPNLEQLRITSKDANTILQAQNLSSLFPEMTFLGLSAYTNEVAFPYWFFENARRLEKLVIESSCFEKIFQDEGQIREKTQTQIKKLILSVLPNLEHICEEGFRIDSVLELLEHLEVAFGKFKYLALSDYPEMKDLEHLEMLVIDSCRVEQIVAMEEGSLKINFNFPQLKIMKLFCLTNLKSFYQGKHILECPSLEILNVCGCKALKMFSFSQMDTDALFSIDKLSPNLEQLTINGTDMSGILKRGENIFDKVEFLCFQCFEETPTVFLDEYFYTIFPNLKIFQMSSSSFEMLFPTTGHLDILISKKIKNLLLCELENLKHICQEDFPLEDLKELVVRNCPSLISLVPSSTSFTNLIHLWVGNCKELNYLITPSTAKSLIQLRTLKIKNCEKMLDVVKIDEKAEEVIIFENLEILGFTNLPSLGSFCCGNQPFIFPSLQSLTAQECPRMEIFSSGVIVAPYVTQIEVGEGTIQWKGDINTTIQHLFLEKVHNIKADNINLVHDWKLTLKLTVE 1846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01715 1846 Gene3D - 143 301 IPR027417 -
Tsu01g01715 1846 Gene3D Ribonuclease Inhibitor 1314 1540 IPR032675 -
Tsu01g01715 1846 Coils Coil 68 88 - -
Tsu01g01715 1846 PANTHER - 1185 1259 - -
Tsu01g01715 1846 PANTHER RPP4C3 1662 1814 - -
Tsu01g01715 1846 PANTHER RPP4C3 1185 1259 - -
Tsu01g01715 1846 Pfam NB-ARC domain 158 390 IPR002182 GO:0043531
Tsu01g01715 1846 PRINTS Disease resistance protein signature 342 356 - -
Tsu01g01715 1846 PRINTS Disease resistance protein signature 984 1000 - -
Tsu01g01715 1846 PRINTS Disease resistance protein signature 248 262 - -
Tsu01g01715 1846 PRINTS Disease resistance protein signature 175 190 - -
Tsu01g01715 1846 Gene3D Ribonuclease Inhibitor 1094 1269 IPR032675 -
Tsu01g01715 1846 PANTHER - 1662 1814 - -
Tsu01g01715 1846 Gene3D Ribonuclease Inhibitor 884 1093 IPR032675 -
Tsu01g01715 1846 Gene3D Ribonuclease Inhibitor 720 883 IPR032675 -
Tsu01g01715 1846 PANTHER RPP4C3 23 1007 - -
Tsu01g01715 1846 PANTHER RPP4C3 1097 1176 - -
Tsu01g01715 1846 PANTHER RPP4C3 1014 1090 - -
Tsu01g01715 1846 PANTHER RPP4C3 1467 1555 - -
Tsu01g01715 1846 SUPERFAMILY RNI-like 1197 1724 - -
Tsu01g01715 1846 Gene3D - 308 396 IPR042197 -
Tsu01g01715 1846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 406 IPR027417 -
Tsu01g01715 1846 SUPERFAMILY L domain-like 464 875 - -
Tsu01g01715 1846 SUPERFAMILY L domain-like 1330 1783 - -
Tsu01g01715 1846 PANTHER - 23 1007 - -
Tsu01g01715 1846 PANTHER - 1097 1176 - -
Tsu01g01715 1846 PANTHER - 1014 1090 - -
Tsu01g01715 1846 PANTHER - 1467 1555 - -
Tsu01g01715 1846 SUPERFAMILY RNI-like 930 1169 - -
Tsu01g01715 1846 Coils Coil 36 60 - -
Tsu01g01715 1846 Gene3D Ribonuclease Inhibitor 463 705 IPR032675 -
Tsu01g01715 1846 Gene3D Ribonuclease Inhibitor 1541 1790 IPR032675 -
Tsu01g01715 1846 SMART AAA_5 172 308 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01715 Tsu-Chr1 16992894 17001894 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01715 176 480 WRKY Transcription Factor Family AT5G45050 23.003 3.93e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01715 - - mtr:MTR_2g089975 1483