Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01689 ATGAGACAATGTAAGTTTTGTGCAACTTGTAAATTTCATCATCCACAACCTGCAGGTCTTCAAATAATATCATCGTCAATAGTTCCTCAGGTTTCACCTCTTCTTATGCTAGTACCTTCACCTATTTATCAACAAATTGTAAAGCCTCCATCCGGTCcttcacaacaacaacaataccATGTACTCTTTGCGAGGCCACCTCTGCTACATGGCTCATTATTCCAAGGTACATACTACATTAAGGAGCAGTTGAGGAATCAGAAGATTGATAATGTCCAGTGTAGGCAGTTGTTGGTGAAGGTAGATTTAATCTACCTTCACCAACAACTGCCTACACTGGACATTATCAATCTTCTGATTCCTCAACTGCTCCTTCAGGTAGTATTGACATTGGAGTAA 399 0.3784 MRQCKFCATCKFHHPQPAGLQIISSSIVPQVSPLLMLVPSPIYQQIVKPPSGPSQQQQYHVLFARPPLLHGSLFQGTYYIKEQLRNQKIDNVQCRQLLVKVDLIYLHQQLPTLDIINLLIPQLLLQVVLTLE 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01689 132 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 3 78 - -
Tsu01g01689 132 PANTHER PROTEIN PHOSPHATASE RELATED 3 78 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01689 3 78 C2H2 Transcription Factor Family AT5G18550 43.421 1.77e-09 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tsu01g01689 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01689 - - mtr:MTR_4g119280 110.538