Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01680 ATGATGGGAAATTCATCTCAAACACCCCCGTTTAATGGTTATATGCCAATGGTGAATGAAAATTTTCCGAGTGGTGGTGCACCTGAATTTCCCAaattttcaacacaaataacaattgcTAATGAAGTCACTCCAAATTTAGAGGATTCAACTCCTAAGAGCAAGAAACACCCGCAACCAACATGGAACACTGAACAAAATTTGGTGTTAATTAGTGGGTGGATTAAATTTTCAACAAGCAGTATTGTCGGGAGAAACCAGAAACATGAAACGTATTGGAGTAATATTGCTGACTATTTTACCGAGCATTGCAAATTTGATCCTCCGCGTGATGACGTTGCATGCCGAAACCGCTTTAATTATATGAACAAATTACTGGGTAAATGGATTGGCGCTTATGATGGCGCTAATCGTTTGCAAGGAAGCGGTTGGTCGGAGAATGACGTTTTGGCAAAAGCGCAGGAAATATACGCATGTGGGAAGAAtgttaaattcaatttaatggCAGAATGGCATGCTCTCCGTGATCAACCACGTTTTAGAAGTCTAGTTGGAGGACATATTGACTCAGGAAGTAGTGGATCTAAGAGATCTCACGAGGATGCATGTCGCTCAAACTCTGTAGGATCTAGTGTTCGTCCTATAGATCCATCAACCGGTGATTTTGATGTCGTAGTCTACTTGCAAAATCGTGAAGTTGAAGAATCTTATATACTAAACCGATTTAGAGAGCGtcgaaaaaaaatattgaaagatGGTGCACCTCATAGTAGAAAATATGTCAATAGAGATCATACAGTTGCAAACCAAAGACTAATTGACGACTACTTTGCCAATGAGCCTACATATGACGATGCAATGTTTCGTCGTCGGTACCGCATGCAAAAACATATTTTCCTTCGAATCGTTAGGGACCTTTCAAGTAGTGATAACTACTTCACCCAGCGAGTTGATGCTGCCAAGAAAGAAGGTATATCACCTTTAGCAAAATGTACCACAACAATGCGAATGTTAGCATACGGTATGACAGCAGATGCAGTCGATGAGTACATCAAAATAGAAGGTACTATTGCATTAGAGTGCTTACGTAGATTTTATAAAGGAATCATACAATTGTATGAGCAAGTGTATCTCAGAGCACCAACCCAAGATGACCTGCAAACAATACTACATGGGGATAAGGGAACCACCACAGTTATTCATGAACCAGTTGGATCTCATGATCTATGGATCTGGCAAGCCTTTTTTGGATGTCCGGGAACGTTGAACGACATAAACGTTCTAGACCGTTCACTTGTTTTTGATGACGTGGAACAGGGAAAGACTCCAAGTGTGAATTTCTATGTGAATCAACGTCCCTATAATATGACATACTATCTAGCTGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCAATTAGACTTCCTCAAAGTGAACCCGATAAGTTATTTGGAAAATATAAGGAGGGATGCCGGAAGGACATCGAACGTGCATTTGGAGCGCTTCAAGCTCGATTTAAAATCATCCATGAACCAACTTGA 1548 0.3921 MMGNSSQTPPFNGYMPMVNENFPSGGAPEFPKFSTQITIANEVTPNLEDSTPKSKKHPQPTWNTEQNLVLISGWIKFSTSSIVGRNQKHETYWSNIADYFTEHCKFDPPRDDVACRNRFNYMNKLLGKWIGAYDGANRLQGSGWSENDVLAKAQEIYACGKNVKFNLMAEWHALRDQPRFRSLVGGHIDSGSSGSKRSHEDACRSNSVGSSVRPIDPSTGDFDVVVYLQNREVEESYILNRFRERRKKILKDGAPHSRKYVNRDHTVANQRLIDDYFANEPTYDDAMFRRRYRMQKHIFLRIVRDLSSSDNYFTQRVDAAKKEGISPLAKCTTTMRMLAYGMTADAVDEYIKIEGTIALECLRRFYKGIIQLYEQVYLRAPTQDDLQTILHGDKGTTTVIHEPVGSHDLWIWQAFFGCPGTLNDINVLDRSLVFDDVEQGKTPSVNFYVNQRPYNMTYYLADGIYPSYPTFVKSIRLPQSEPDKLFGKYKEGCRKDIERAFGALQARFKIIHEPT 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01680 515 PANTHER PUTATIVE-RELATED 1 217 - -
Tsu01g01680 515 Pfam Plant transposon protein 390 515 IPR006912 -
Tsu01g01680 515 PANTHER - 1 217 - -
Tsu01g01680 515 MobiDBLite consensus disorder prediction 185 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01680 Tsu-Chr1 16505741 16508020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01680 45 198 Glutathione S-transferase Gene Family AT5G41240 28.931 1.48e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01680 - - csat:104758417 471.47