Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01668 ATGGTGAATGATTCAACAACGTACGATTCCATGAAGTACGATGATAATGGTGAAAGGATTGTGATGTTGTTTGGTGTAAACATAGCAAAGAATCCAACCAAAGTTGTTGATGACACTCCGAAGGACAACTCTAGTACGGAAAATACCAATTATATCCCTCATGATGACAATAAGGATAATTCTATTTTTGTACACAAGAATGAGAATAATGAACTTTCAGAATTtgattccaagcatcaaaagatgaaaatggAATTTGAACATATGTGGGAGAATGATAATGACAATGATCATAACGAATATCCAAACTTGGATATTGATCAAAGCTCAAGAcatgaaaagataaaaaaggTGATACCATGGACACAGAAAGAGCACAGGGCTTTCTTGGAAGGTTTAAAGGCAGTTGGAAAAGGAAGATGGAAGCATATATCTAAAAACTATGTGATGACCAAGAATCCTACTCAGGTGGCTAGTCATGCACAAAAGTATTTTCAAAGAAGTGAAATTGACCCAATGTTTAGAAACAAACGCCAAAGCATCTTTGACATGATACTTGATGATGAATATGAGAATTCAAAAGCTTCTGGTGGTTCTTCTTCATTGGGACCATCCTCCAGAAGCAACTCTCATTAG 636 0.3349 MVNDSTTYDSMKYDDNGERIVMLFGVNIAKNPTKVVDDTPKDNSSTENTNYIPHDDNKDNSIFVHKNENNELSEFDSKHQKMKMEFEHMWENDNDNDHNEYPNLDIDQSSRHEKIKKVIPWTQKEHRAFLEGLKAVGKGRWKHISKNYVMTKNPTQVASHAQKYFQRSEIDPMFRNKRQSIFDMILDDEYENSKASGGSSSLGPSSRSNSH 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01668 211 CDD SANT 120 165 IPR001005 -
Tsu01g01668 211 SUPERFAMILY Homeodomain-like 116 167 IPR009057 -
Tsu01g01668 211 Pfam Myb-like DNA-binding domain 120 165 IPR001005 -
Tsu01g01668 211 PANTHER TRANSCRIPTION FACTOR KUA1 20 194 - -
Tsu01g01668 211 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 116 167 IPR006447 GO:0003677
Tsu01g01668 211 ProSiteProfiles Myb-like domain profile. 120 165 IPR001005 -
Tsu01g01668 211 MobiDBLite consensus disorder prediction 193 211 - -
Tsu01g01668 211 PANTHER TRANSCRIPTION FACTOR KUA1 20 194 - -
Tsu01g01668 211 SMART sant 117 167 IPR001005 -
Tsu01g01668 211 MobiDBLite consensus disorder prediction 35 59 - -
Tsu01g01668 211 MobiDBLite consensus disorder prediction 192 211 - -
Tsu01g01668 211 Gene3D - 119 170 - -
Tsu01g01668 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 169 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01668 Tsu-Chr1 16408508 16413359 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu01g01668 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01668 - - gmx:106794827 103.219