Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01666 ATGGGCTCCGTCGACAAATACCACGTGATCGAGCTAGTCGGCGAAGGTTCCTTCGGTAAAGTCTACAAAGGAAGACGCAAATACACCGGACAgaCTGTTGCTATGAAGTTCATCATGAAGCACGGTAAAACTGAAAAGGATATTCACAATTTGAGACAAGAAATCGAGATATTAAGAAAGTTGAAGCATGAAAATATTATCCAAATGCTTGATTCCTTTGAAACCCCACAAGAGTTTTGCGTTGTCACAGAATTTGCACAAggTGAGCTATTTGAGATTCTTGAGGATGATAAATGCCTTCCTGAGGAACAAGTCCAAGCAATTGCAAAGCAATTGGTAAGAGCCTTACATTATTTGCATTCCAACCGGATCATTCATCGTGATATGAAGCCCCAAAATATTCTCATTGGTTCCGGATCAATTGTCAAGCTTTGTGATTTTGGATTTGCACGTGCGATGTCCACAAATACAGTTGTTTTGAGATCTATAAAAGGAACTCCATTATACATGGCTCCGGAACTTGTCCGGGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGTGTTATATTGTATGAGTTATTCGTAGGCCAACCACCATTTTACACAAATTCTGTTTATGCTCTCATCAGACACATTGTTAAGGATCCAGTTAAATATCCTGAACATATGACTCCAAATTTCAAAAGCTTTTTGAAGGGTTTGCTTAACAAGGCACCAGAAAGTAGACTAACTTGGCCGGCTCTTCTTGAACACCCGTTTGTTAAAGAAACTAACGACAAAATTGAAGCCAGGGAATTGCGTGAGATAAGTGGTTCACCAAGGGACAGCAATATAACACAAAGGGTTGAAGCTAAAAGGATTCAAACTTCAACAGGTTTGGAAGAGCATATTTCTTCACCACTTCAGAATGAAGGTCAGTTAAATGTTCCTAACATAAACAAAACCAATTCTAAAGTGCTTGATGAGTCTCCCggattttcaaatcaaaatgatgTAGGAGAGTCAGGCTGCCAAAGACTGGACAGACTTGAAAGTAACTCTCGCACTGCCAAAGGTGCAAAAGTAATTGGTCAAGACAATGAGGCATTGGGACATATTCTGCAACCACTGAAACGATGGTCAAAGGGATCTCAAAATATTGTCAGTGATCAAGATCTTCCTGCTTCAAACCAGTCACTGAGAATTCTGTCAAATCTAGTTGCTGCCGGTGTCTTCAATTCTATTGGACAAATAGATGAACTAATAAGCGAGCTCCTTTTGTTTATCAGATCTATTTTAGCAATGAAATCGGCTGAAGTTTTTGACTTGTTAACAAAGGGTTTCTCTATCACTAAAATTTTGCTAGATAATGGTGGGAGTTCCTTTTCAAGCTCATATTTTAATCACTGGGTTGAATTAGTTGAAATCTATTCTCAGGTTGTAACTTCAAACAATGATACATCTGGAAGAGTTCTTTATGAGTCTAGTGCTTGCATTACGGTCATTTTGTCTAAAGTTGCTCAGGTGCTTAGATCATCTCAAGTGTCAGGCTCAGAGTCACTGAATGTAACAGCTAACAGAATTATAGAGCATGCAAAAACATCTGGTTTAGTAGACCATTTGTGCCAGTGCTTAGCGACCTCAGGCTCGAGTCTTATTGCTGGTTCTTCCAATATGCTACGGGCAGCTTCTGAAGCATGCAGAGCTGCCTGGTCCTTGATTAATGCTCTGGACAccctttttaataaaaaaagtgcCATTTTGTTTCCAATCAGTGCATTGCCGAGTCATTTTTTGAAGAGGACAGACATTATGGATCACAAACAAGATCCCTTGTACGATGAAGATTCAACAAAAATGGTTGATGCAGTGACAAGAGCGTTCCTGAGATCCAAAGCTGTTCAGGTTGCCGTGTACTATTGTTTTCACCAACGTATTGAGTCTGCTACGATTTGTGGTCTTCAGCTCTTGTCAAGGTGCTGCCTCCATAGTGGAATTGTTCCAGCCGTCCTGTGTGGTTTGCCCAGTTCGCTTCCCGTGACTACTGTTGTTAGTGGTGGCGGTGATGGAACTATTGTTTCAGAGATTTTCTCGGTTTTGTCAATATGCAGTTCTTCTCTCAACAAAGATGAACACAGTGTAGAACCAAGTAACACTAAATGCAAATTAGCAAACCCTTCTGCTCTGATTCGTCATTCATGTCTTATTCTTACAATAATTGCACAATATTTGAAGTCAACTGGCAGAAACTCTGCAATTTTTATGCTCACCAACTCACAAAAGAAGCAGCTCGCTCGACTCTCAGTTCTTGCTCATCATGTTTCTTATGATGATAAAACAAAAGCCTCTTTCCAACTTCAAAGTTCATCAGCCATGTTGGCTTTGGCATCCATTCTTTCGCTCGAATCTGGGACTTTGGTCGAGTCTCCGATATCTGAAATTGCTATGCCTTTAATTCCtcgagcttctacactaagtgaCCATCTAAAATTTTCACCAGGAAATGAAAATGAACCGGACCCTGGCAATTTTACTGGGAAGCTCCCATATTGGCTAGGGGTAAGAGATGGGTGTGTTGGTCTTGTAGATTTCAAACTCAAGTTGGGAGGACCGTTAGCTATTCAGCAGTTGTGTGCAAGTGGTATACCACTACTTCTAATCGGCTTATTAAGCAATCCATTTTTAAATCCTTCTCAAGAAAACGAGTGCCTAAACGACAGAGTTGGATTATCTCCTATAGGCGTTGTGTGGACAATTTCATCATTATGTCATTGTCTCTCTGGCGGCGCTTTGATTTTTCGTCAGATTTTGATTAGGAATGAACATGTTAAGCTCGTATCCAACTTAATATGTGATGTTCATCTTAAGTTGATAAAATGCTGGACCGGACCTGGTGGAGGGAGAGCAGGAGTCAGAGATATAATAAATGCAGTCATAGATCTCTTAGCATTTCCTTTTGTTGCTCTTCAAAATGCACCTGGCTTGCCATCAGCCACTGCTTCTGTCAGCAGTGGGTCTCTTCTTAATGTTGGTTCCCCTGGCCAGAGAGTTTACATGGAAGACAAGGATACAGTTAAGGCAATAGAAGAAGACATGGGAAAATACATTAAGATCCTCGTGGAGGTTGGTGTGCCTAGTATTATCCTTCGATGCCTCGATCATATGGAGTTGCATGATTTGGGCAGGCCTGTGGCCTTTCTTGCTAAAATGGTGTGCCAACGACCTTTAGCAGTTCAACTTGTGAGTAAAGGTCTTTTGGATCCAAATAGAATGAGAAGGTTGTTTGACCTGTCGGGACCAAAAGAGGTTATGCTGGATGCTCTTATGATAATTTCCGATCTTGCTCGTATGGACAAGGGATTCTATGAGTATATTAAAGGTGCTTCTATTTTGGAGTTCTTAAAAAGTTTTCTTTCACACGAGGATCCGAATGTGCGTGCCAAAGCTTGCAGTGCTCTTGGTAATATGTGTCGCCACAGTGCCCAGTTTTACAGTTCTTTGGCAAGATATCAAATCATTAGTATCCTTATTGACCGATGCTCCGATCCAGACAAACGAACAAGGAAGTTTGCTTGTTTTGCTATTGGAAATGCGGCTTACCACAATGACGTATTGTATGAAGATTTGAGGAGGTCGATCCCTCATTTGGCAAGATTGTTGCAAGTGGCAGAGGAAGACAAGACCAAGGCAAATGCTGCCGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAGACTTTGTGGAGACATTGTGTCTAAAGGAGCAGTTCAGTCTCTTCTGGAATTAATTTCCGATTATGCAGTATCAGCACTAAATCCAAGCAGAAATGATTCAACAAACGAGTCTCCTTTAAAGATTGCTCTCTTTTCCCTGGCAAAGATGTGTGCCCATCCACTCTGCAGACAGTTCATTCGTTCATCGTCTTTGTTCCATGTAATTGGAAGGCTTCAACAGTCTCCAGAATCATCCATTGCCAAATATGCATCTGTGATCGTTAGCAAAGTTGAACCTTGA 4002 0.4053 MGSVDKYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHENIIQMLDSFETPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGSGSIVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPEHMTPNFKSFLKGLLNKAPESRLTWPALLEHPFVKETNDKIEARELREISGSPRDSNITQRVEAKRIQTSTGLEEHISSPLQNEGQLNVPNINKTNSKVLDESPGFSNQNDVGESGCQRLDRLESNSRTAKGAKVIGQDNEALGHILQPLKRWSKGSQNIVSDQDLPASNQSLRILSNLVAAGVFNSIGQIDELISELLLFIRSILAMKSAEVFDLLTKGFSITKILLDNGGSSFSSSYFNHWVELVEIYSQVVTSNNDTSGRVLYESSACITVILSKVAQVLRSSQVSGSESLNVTANRIIEHAKTSGLVDHLCQCLATSGSSLIAGSSNMLRAASEACRAAWSLINALDTLFNKKSAILFPISALPSHFLKRTDIMDHKQDPLYDEDSTKMVDAVTRAFLRSKAVQVAVYYCFHQRIESATICGLQLLSRCCLHSGIVPAVLCGLPSSLPVTTVVSGGGDGTIVSEIFSVLSICSSSLNKDEHSVEPSNTKCKLANPSALIRHSCLILTIIAQYLKSTGRNSAIFMLTNSQKKQLARLSVLAHHVSYDDKTKASFQLQSSSAMLALASILSLESGTLVESPISEIAMPLIPRASTLSDHLKFSPGNENEPDPGNFTGKLPYWLGVRDGCVGLVDFKLKLGGPLAIQQLCASGIPLLLIGLLSNPFLNPSQENECLNDRVGLSPIGVVWTISSLCHCLSGGALIFRQILIRNEHVKLVSNLICDVHLKLIKCWTGPGGGRAGVRDIINAVIDLLAFPFVALQNAPGLPSATASVSSGSLLNVGSPGQRVYMEDKDTVKAIEEDMGKYIKILVEVGVPSIILRCLDHMELHDLGRPVAFLAKMVCQRPLAVQLVSKGLLDPNRMRRLFDLSGPKEVMLDALMIISDLARMDKGFYEYIKGASILEFLKSFLSHEDPNVRAKACSALGNMCRHSAQFYSSLARYQIISILIDRCSDPDKRTRKFACFAIGNAAYHNDVLYEDLRRSIPHLARLLQVAEEDKTKANAAGALSNLVRNSDRLCGDIVSKGAVQSLLELISDYAVSALNPSRNDSTNESPLKIALFSLAKMCAHPLCRQFIRSSSLFHVIGRLQQSPESSIAKYASVIVSKVEP 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01666 1333 SUPERFAMILY ARM repeat 1027 1330 IPR016024 -
Tsu01g01666 1333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Tsu01g01666 1333 ProSitePatterns Protein kinases ATP-binding region signature. 13 40 IPR017441 GO:0005524
Tsu01g01666 1333 Pfam Protein kinase domain 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01666 1333 SMART arm_5 1114 1154 IPR000225 GO:0005515
Tsu01g01666 1333 SMART arm_5 1238 1292 IPR000225 GO:0005515
Tsu01g01666 1333 SMART arm_5 1197 1237 IPR000225 GO:0005515
Tsu01g01666 1333 Gene3D - 1058 1331 IPR011989 -
Tsu01g01666 1333 CDD STKc_STK36 5 257 - -
Tsu01g01666 1333 Pfam HEAT repeats 1128 1232 - -
Tsu01g01666 1333 SUPERFAMILY Protein kinase-like (PK-like) 4 286 IPR011009 -
Tsu01g01666 1333 ProSiteProfiles Protein kinase domain profile. 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01666 1333 PANTHER PROTEIN KINASE RELATED 1 1332 IPR045193 GO:0004674
Tsu01g01666 1333 Gene3D Transferase(Phosphotransferase) domain 1 2 324 - -
Tsu01g01666 1333 SMART serkin_6 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01666 1333 Coils Coil 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01666 Tsu-Chr1 16384170 16395915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01666 4 274 AGC Kinase Gene Family AT3G08730 37.324 4.52e-47 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Tsu01g01666 Pkinase 1.5e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01666 K06228 - gmx:100792102 2131.29