Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01665 ATGGAACAACAAACCTTTGATTCCACCTTCACTTTTTGGTCCTCAAACAtgttacaaattcaaaattcaatttttgaaagCAAAAACATGgtacaaacaaaaacacaaacccATGTTCAAATTCCTCAAACCTCTTTCTCAAAGCCTCCAAGATCAACCTCAAATTTAAGCAATAGAAAACCCTCTTTGAACATCACAATCCCTTCCATAACAAAAACTCTCccacaacaaaaaataataaaaagtgaaAACACAAACACCAAAGAGGATAATAATAAACACTATAGAGGTGTTAGAAGAAGACCATGGGGAAAATTTGCTGCAGAAATTCGTGACCCTAATAAAAAAGGTTCAAGAGTATGGCTTGGAACCTTTGAAACAGCCATAGAAGCTGCAAAAGCTTATGATAAAGCTGCTTTTCAAATGAGAGGAAGTAAAGCTATAATGAATTTTCCTTTAGATGTTGATACTGATTCTGTAGAATCATCACTTTCTAGTTGCATCAAAGTTGGTGAGAAAAGACAAAGAGATGAAGGAAACTATGTTGAGATCAATAATAGtaataagcaagtgaagaaagaagaagGGGTTTCTTCAATTTGTCCTTTGACTCCTTCATGTTGGAAAGGCTTTTGGGATACTGATGTTATGGGAACTATCTTTAGTGTTCCTCCTTTGTCACCCTTATCTCCACTCATGGGATTTTGA 708 0.3107 MEQQTFDSTFTFWSSNMLQIQNSIFESKNMVQTKTQTHVQIPQTSFSKPPRSTSNLSNRKPSLNITIPSITKTLPQQKIIKSENTNTKEDNNKHYRGVRRRPWGKFAAEIRDPNKKGSRVWLGTFETAIEAAKAYDKAAFQMRGSKAIMNFPLDVDTDSVESSLSSCIKVGEKRQRDEGNYVEINNSNKQVKKEEGVSSICPLTPSCWKGFWDTDVMGTIFSVPPLSPLSPLMGF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01665 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 7 224 - -
Tsu01g01665 235 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Tsu01g01665 235 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Tsu01g01665 235 Gene3D AP2/ERF domain 93 154 IPR036955 GO:0003700|GO:0006355
Tsu01g01665 235 MobiDBLite consensus disorder prediction 35 66 - -
Tsu01g01665 235 Pfam AP2 domain 94 144 IPR001471 GO:0003700|GO:0006355
Tsu01g01665 235 ProSiteProfiles AP2/ERF domain profile. 94 152 IPR001471 GO:0003700|GO:0006355
Tsu01g01665 235 SUPERFAMILY DNA-binding domain 94 154 IPR016177 GO:0003677
Tsu01g01665 235 CDD AP2 93 152 IPR001471 GO:0003700|GO:0006355
Tsu01g01665 235 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 7 224 - -
Tsu01g01665 235 SMART rav1_2 94 158 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01665 Tsu-Chr1 16380295 16381776 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01665 52 234 AP2-EREBP Transcription Factor Family AT5G51190 51.295 1.31e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tsu01g01665 AP2 3.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01665 K09286 - gmx:100795866 242.662