Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01646 ATGGGGAACACTTGTGTTGGTCCTAGCATTTCAAAGAATGGTATTATTCAATCATTTTCTGCGGCGATTTGGCGGACGCAACCGTCTGATCCTGAAGGATCAGTGTCTAATAGAGGATCAGTAAATGAGGGGAGAATTGATAATGAGACCCAATCTTCGTTGCCTGTTCAAAACAAACCTCCTGAACAGATAACTATGCCGAAACCGGAAGCAAAACAAGAGACGAAATCAGAACCGGAACCGGAGAAGGAAAAGAAGAAACATAAGAGACCTTCTGTTAAGAGAAGTTCTAGTGCAGGACTTCGTGTTGATTCCGTGTTGTTACGAGAAACTGGTAATTTTAAGGAATTTTTTAGTCTTGGGAGGAAACTTGGACAAGGTCAATTTGGGACAACGTTTTTGTGTATCGAGAAAGAAACCGGGTATCAGTTTGCGTGTAAATCTATTGCGAAGAGGAAACTTGTAACCGACGACGATGTTGAGGATGTGAGAAGAGAAATTCAGATAATGCATCATTTGGCTGGACATCCTAATGTTATATCGATTAAAGGTGCTTATGAGGATGCAGTGGCTGTTCATGTTGTGATGGAATTATGTGCTGGTGGTGAGCTTTTTGATCGGATTATTCAGCGTGGACATTATACCGAAAGAAAGGCGGCTGAACTTATTAGGActattgttggtgttgttgaAACTTGTCATTCTCTTGGTGTGATGCATAGAGATCTTAAACCTGAGAATTTTCTCTTTGTCAATGAGCAAGAGGATTCGCTACTCAAAACTATTGACTTTGGATTATCTGTGTTCTTTAAGCCAGGTGATATATTTATTGATGTGGTTGGCAGCCCATATTATGTTGCTCCGGAAGTTTTGAAAAAGCGTTACGGTCCTGAAGCAGATGTTTGGAGTGCCGGTGTTATCCTTTACATTCTTTTGAGCGGAGTACCTCCATTTTGGGCTGAAAGCGAACAAGGGATATTCGAACAGGTTATGCGTGGTGATCTTGACTTCGATTCAGATCCCTGGCCTGCAATTTCTGAAAGTGCAAAAGATTTAGTAAGGAAAATGCTTGTTCGTGACCCTAGAAGGCGGATGACTGCACATCAAGTATTATGTCATCCTTGGGTTCAAGTTGACGGTGTAGCTCCTGACAAGCCACTTGATTCTGCCGTATTAAGTCGATTGAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTATAGTAAGTCTGTCGATATGGAAATTTCAAAGTCGTTTGTTATGTGGTTTGGACGTGATAGTAATACGTAAAATTGAGTAA 1308 0.4044 MGNTCVGPSISKNGIIQSFSAAIWRTQPSDPEGSVSNRGSVNEGRIDNETQSSLPVQNKPPEQITMPKPEAKQETKSEPEPEKEKKKHKRPSVKRSSSAGLRVDSVLLRETGNFKEFFSLGRKLGQGQFGTTFLCIEKETGYQFACKSIAKRKLVTDDDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELIRTIVGVVETCHSLGVMHRDLKPENFLFVNEQEDSLLKTIDFGLSVFFKPGDIFIDVVGSPYYVAPEVLKKRYGPEADVWSAGVILYILLSGVPPFWAESEQGIFEQVMRGDLDFDSDPWPAISESAKDLVRKMLVRDPRRRMTAHQVLCHPWVQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIVSLSIWKFQSRLLCGLDVIVIRKIE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01646 435 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 67 411 - -
Tsu01g01646 435 MobiDBLite consensus disorder prediction 69 87 - -
Tsu01g01646 435 Gene3D Transferase(Phosphotransferase) domain 1 205 420 - -
Tsu01g01646 435 SUPERFAMILY Protein kinase-like (PK-like) 118 377 IPR011009 -
Tsu01g01646 435 Gene3D Phosphorylase Kinase; domain 1 120 204 - -
Tsu01g01646 435 MobiDBLite consensus disorder prediction 23 60 - -
Tsu01g01646 435 ProSitePatterns Protein kinases ATP-binding region signature. 124 151 IPR017441 GO:0005524
Tsu01g01646 435 SMART serkin_6 118 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01646 435 Pfam Protein kinase domain 119 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01646 435 MobiDBLite consensus disorder prediction 23 98 - -
Tsu01g01646 435 PANTHER SERINE/THREONINE-PROTEIN KINASE 67 411 - -
Tsu01g01646 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Tsu01g01646 435 CDD STKc_CAMK 117 375 - -
Tsu01g01646 435 ProSiteProfiles Protein kinase domain profile. 118 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01646 Tsu-Chr1 16162997 16168566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01646 1 411 EF-hand Containing Proteins AT5G04870 73.543 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu01g01646 Pkinase 1.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01646 K13412 - gmx:100797449 689.493