Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01586 ATGTCCAAAAACTCATCTCATGATGATAATGTTATTGTTGCTGctccaaaatcatcaacaaacaCTAACTCAAGAATACCAAGATCACCCCCACCTCCAAGTGACATAAGTCATCTAAAGCAATTCACATATAATGAATTAGAATTAGCAACAAGAAATTTTAGACCTGGACTTATTCTTGGGGAGGGAGGGTTTGGTAAAGTGTTCAAAGGCTGGATAAGCTGTAATCAGAGGTCACCTTCAATTCCAAGGATGGCAGTTGCTGTAAAGACTCTCAATAGAGATGGAACCCAAGGTCACAAAGAATGGGAGGCTGAAATTAACTGTCTAGGTGCTCTCCAACACCCAAATTTGGTTAAGCTTATTGGGTATTGCAGTGAAGATGAACATAGAATGCTTGTCTATGAGTATATGCAAAGAGGATGCcttgaaaatcatttgtttagaAGTAAgtGGTTAAATCCTCTACCATGGACTGTGAGAATTAAAATTATGCTTGGTGCTGCAAAAGGCCTTGCATTTCTCCATGAGGAAGCTGAAAAACCACTAATATACAGAGATTTCAAAACATCCAATATCCTATTGGAttcgcAATATAATGCTAAACTTTCTGATTTTGGGCTTGCTAAAGATGCTCCAACGGGAGACAAGACTCATGTTTCAACTCAAGTGATGGGAACTCAAGGCTATGTAGATCCTTTGTATGTGGTGTCAGGTCACCTTACTTCCAAGAGTGATGTCTATAGTTTTGGTATAGTTCTCCTTGAGATGTTAACGGGAAGACAATCAATTGACTACCAAAGGTCCGAAAGTGAACAATGTTTAGTCGAATGGGCGAAACCATACATAAAATCAAGAATAGGGTTTCATCAATTGATAGATCCGAAACTTGAAGGTATATACTCAGCAAGAGGAGCGTACAAGGCATTCAAGTTAGTTTCACTTTGCCTTAGTCGCGATCAAAACTCAAGACCTCTAATGAGTGAAATTGCTAAGGTGCTCCAAAATATCCTTGATTGTAAGATTGACATGCCTCCATTAAAAATTAAGAGTAATTCACATGTTGGCCCTTCCTCATCATCTCCAGTTTCATCTACTCCAACAAGATTTCGAGCATCACCATTGGACCTTACAGCTACATTTCCTTCACCAAATCCTCCTTGTGGTGAAAATCCATGA 1179 0.3766 MSKNSSHDDNVIVAAPKSSTNTNSRIPRSPPPPSDISHLKQFTYNELELATRNFRPGLILGEGGFGKVFKGWISCNQRSPSIPRMAVAVKTLNRDGTQGHKEWEAEINCLGALQHPNLVKLIGYCSEDEHRMLVYEYMQRGCLENHLFRSKWLNPLPWTVRIKIMLGAAKGLAFLHEEAEKPLIYRDFKTSNILLDSQYNAKLSDFGLAKDAPTGDKTHVSTQVMGTQGYVDPLYVVSGHLTSKSDVYSFGIVLLEMLTGRQSIDYQRSESEQCLVEWAKPYIKSRIGFHQLIDPKLEGIYSARGAYKAFKLVSLCLSRDQNSRPLMSEIAKVLQNILDCKIDMPPLKIKSNSHVGPSSSSPVSSTPTRFRASPLDLTATFPSPNPPCGENP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01586 392 MobiDBLite consensus disorder prediction 1 37 - -
Tsu01g01586 392 SUPERFAMILY Protein kinase-like (PK-like) 40 369 IPR011009 -
Tsu01g01586 392 MobiDBLite consensus disorder prediction 1 25 - -
Tsu01g01586 392 ProSiteProfiles Protein kinase domain profile. 54 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g01586 392 MobiDBLite consensus disorder prediction 351 392 - -
Tsu01g01586 392 PANTHER TYROSINE KINASE FAMILY PROTEIN 28 359 - -
Tsu01g01586 392 ProSitePatterns Protein kinases ATP-binding region signature. 60 90 IPR017441 GO:0005524
Tsu01g01586 392 Gene3D Phosphorylase Kinase; domain 1 27 137 - -
Tsu01g01586 392 Pfam Protein tyrosine and serine/threonine kinase 59 332 IPR001245 GO:0004672|GO:0006468
Tsu01g01586 392 PANTHER OS01G0588500 PROTEIN-RELATED 28 359 - -
Tsu01g01586 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Tsu01g01586 392 Gene3D Transferase(Phosphotransferase) domain 1 138 345 - -
Tsu01g01586 392 MobiDBLite consensus disorder prediction 352 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01586 Tsu-Chr1 15483970 15487548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01586 4 334 Glycoside Hydrolase AT3G07070 47.289 5.58e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu01g01586 PK_Tyr_Ser-Thr 9.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01586 - - mtr:MTR_3g462840 455.677