Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01571 ATGAGACCAAGTTCAAGGCCATGTACTGCAATAACAAGTATTTCAAATGGTTACAATTCTAGTAACATTGATGTTGATTTTCCTACTTCAACCAAGTCTTTGAACTTTGCTCCTAGACCTGGATTTGAAACAGTTGGGACAAAATGTATTGTGAAGGCTAATCACTTCTTTGCAGAGTTACCAGACAAGGATACCTCTCCAAGGGGTGAAAAGTGGTGA 219 0.3881 MRPSSRPCTAITSISNGYNSSNIDVDFPTSTKSLNFAPRPGFETVGTKCIVKANHFFAELPDKDTSPRGEKW 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01571 72 PANTHER PROTEIN ARGONAUTE 10 1 65 - -
Tsu01g01571 72 MobiDBLite consensus disorder prediction 1 22 - -
Tsu01g01571 72 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01571 Tsu-Chr1 15370355 15370573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01571 32 64 Eukaryotic Initiation Factors Gene Family AT5G43810 78.788 3.83e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01571 K11593 - gmx:100807513 92.4337