Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01556 ATGATGAGAAATTCACCTCAAACACCCCCGTCTAATGATTATATGTCAATGGTGAATGAAAATTTTCCGAGTGGTGGTGCACCTGAATTTCCCgaattttcaacacaaataacaattgcTAATGAAGTCACTCCAAATTTAGAGGATTCAACTCCTAAGAACAAGAAACACCCGCAACCAACATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTTCAACAAGCAGTGTTGTCGGGAGAAACCAGAGACGTGAAACGTATTGGAGTAATATTGTTGAGTATTGTAATGAGCATTGCAAATTCGATCCTCCGCGTGATGACGTTGCATGCCGAAACCGCTTTAATTATATGAACAAATTACTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTTTGCAAGGAAGCGGTGCACCACCACTCGGAAAAGTTTCATTCACCATTGGCATATAA 471 0.3885 MMRNSPQTPPSNDYMSMVNENFPSGGAPEFPEFSTQITIANEVTPNLEDSTPKNKKHPQPTWNTEQNLVLISGWIKFSTSSVVGRNQRRETYWSNIVEYCNEHCKFDPPRDDVACRNRFNYMNKLLGKWIGAYDGAKRLQGSGAPPLGKVSFTIGI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01556 156 PANTHER - 1 143 - -
Tsu01g01556 156 PANTHER PUTATIVE-RELATED 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01556 Tsu-Chr1 15168252 15169896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01556 45 143 Glutathione S-transferase Gene Family AT5G41240 29.808 5.50e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01556 - - mtr:MTR_3g067785 214.157