Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01543 ATGGCAGAAGATGGGTTGTCAATTTTGGCATGTTATAATGTTACATTTAGTTCTACAAATGATATTTGGATGACTGATGATGTTATGGTAAAACGTGTTCCTCTTTTGTGTCTCCAAATTGCTTATGATCTCTTGGTTTCTCGTTTTTTCTACTTCATCCTTAAGCCTATTCGTGCGCCCCTCATTGTTGCACAGATTTTGGCTGGATTTTCTGTGAGTCCAACTCTCTTGGGAAATTTCAAACCGATATTTAACTTGTTTTATGATCAACAAGGAATCTTAGCCATTGAAACCTTTGCAAACTTGGGAATATTGTACTATGTGTTCCTAAGTGGTTTAGAAATGAATTCAGACGTAATCTTAAGATCGAGAAAAAAAGGTACAAGCATAGCAGTTGCTGGCATTGTGACATCAATGTTATTAGGTGTTGGATTGCTTACTGTACAACACAAACTTGAAGATGAAAATGATGCTTTCTCACTAACACCTAAAGAAAATCATAAGGaatcctatttattttattgtttagcACTTTCTGTCACGGGTTTCCCAGTCCTTGCAAGAATCTTAGCTAAGCTTAAACTTTTGTATACAAAGCTTGGAAAAGATGCATTAACAGCAGCTATGTTAACTGATGCATATGGTTGGGTTTTATTCACATTGTTGATTCCTTATTCTAATTATGGTGGAAAACCTTTTCTCTCAGTAATCAGTACCTTATTGTTcatagttttttgttttactgTGGTAAGACCTATCCTTACTCCAATCATTGAAGAGAAAACGAGTACGAACACATGGCGCAAATCGCAATTGTTGGACTTGTTCATGGGAGtgtttatttgttcatttattaCAGATTGTCTTGGTACACATCCTATTGTTGGAGCTTTtgtgtttggattgattttgcCTCATGGGAAGTTTGCCGATATGGTTATGGAAATGTCAGATGATTTTGTTTCTGGGATTTTATGTCCTGTCTTCTTTGCTGGATTTGGTTTTAGACTCAACTTGCCTTTCCTTTTTCAGCAACGATCTGCAGGTTTAATGATGGTGGTTGTGGTTTTGTTATGCATACCAAAAGTTTTGAGCTCTTTGATTGTTACTTTTTTCTTCGGTATTCCTGCTCGAGATGGCCTTGCCATTGGATTGCTTCTCAACACCAAGGGCGTCATGGCTGTCATACTACTAAATGTTGCTTGGgataaaaagaTTTTGGATCCATACTGTTTCATGGTTATGATGCTTGCTATTGTATTAATGACAGTGATTGTTTCTCCCTTGATAAGTGCTATATACCAACCAAAATTCCGATTCATGCAATCGCAATTAAAGACCATGGAAAAGCTAAGGTTCGATATGGAACTTCTAGTTGTAGCCTGTGTTCACAATACTAAACATGCCAATAGTATGATCCATGTCCTTGAAGCCACAAATGCAACCAGAGTTTCACCTATACATGTCTCGGTACTTCACCTAGTTGAACTCACTAGACATGGCACAGCTATTCTTGTTTCACAAATGGATCATTCAGACAGCACTGTTGGAACAGAAACAACCAACTATGGATCACAATCAGAGTTTGACAGCATAACTAATGCATTTGAAGAATTTGTAAAACAGTACAATGCTGTTAGAATTGACACATCAAATGTTGTCTCATCCTACACAACTATCCATGAAGACATATTCAATGTAGCCGAAGAGAAACGCGCGAGCTTGATTCTCGTTCCCTTTCACAAAGAGTACTCGACAATAGAAGGTGCTTCAGAAATAATCAACAATCAACATTGTGAGataaacaaaaatgttttaCAACAAGCACCTTGTTCTGTAGGGATTTTTGTGGACCGTGGTTTAGGATcattattagaaacaaaaatgcGCATTGCAATGATCTTCATTGGAGGACCTGACGATCGTGAAGCCTTGTCTATTGCGTGGAGAATGGCAGGGCATTCAGGAACACAATTACATGTTGTGAGGATTCATTTGTTAGGTAAGGCTGCAGAAGAAAAATTATCGAAATCGGAAAAAAAAGAGTCTAATAATGGAATATTGTCAACGGTTATGGACAGTGTGATGCAAAAAGAGTTAGATGAAGAGTACTTAATTTCCTTCAGGCACAAGGCAGTGAACAATAATGATTCTATTGTTTATTCAGAGAAGGAAGTGCAATCCGATACTGGTGAAGAGATTCCGACACTTTTGAACGAGATTGATAAACCTGGATATGATCTGTACATTGTTGGACAAGGAAGTGGTAAGGACATGAAGATTTTTTCGAGTTTGTTTGAATGGTGTGACCATCCTGAACTTGGTGTTGTTGGAGACATATTGGCTTCAACTAGTTTTGGTTCACAATCTTCTGTGCTTATCGTGCAGCAATATACGGTTGGGAGAAAAACTGCTGTTAAACAATGTCATCGTAAATCGAAAACTGGTCctgaaattttgtaa 2463 0.3609 MAEDGLSILACYNVTFSSTNDIWMTDDVMVKRVPLLCLQIAYDLLVSRFFYFILKPIRAPLIVAQILAGFSVSPTLLGNFKPIFNLFYDQQGILAIETFANLGILYYVFLSGLEMNSDVILRSRKKGTSIAVAGIVTSMLLGVGLLTVQHKLEDENDAFSLTPKENHKESYLFYCLALSVTGFPVLARILAKLKLLYTKLGKDALTAAMLTDAYGWVLFTLLIPYSNYGGKPFLSVISTLLFIVFCFTVVRPILTPIIEEKTSTNTWRKSQLLDLFMGVFICSFITDCLGTHPIVGAFVFGLILPHGKFADMVMEMSDDFVSGILCPVFFAGFGFRLNLPFLFQQRSAGLMMVVVVLLCIPKVLSSLIVTFFFGIPARDGLAIGLLLNTKGVMAVILLNVAWDKKILDPYCFMVMMLAIVLMTVIVSPLISAIYQPKFRFMQSQLKTMEKLRFDMELLVVACVHNTKHANSMIHVLEATNATRVSPIHVSVLHLVELTRHGTAILVSQMDHSDSTVGTETTNYGSQSEFDSITNAFEEFVKQYNAVRIDTSNVVSSYTTIHEDIFNVAEEKRASLILVPFHKEYSTIEGASEIINNQHCEINKNVLQQAPCSVGIFVDRGLGSLLETKMRIAMIFIGGPDDREALSIAWRMAGHSGTQLHVVRIHLLGKAAEEKLSKSEKKESNNGILSTVMDSVMQKELDEEYLISFRHKAVNNNDSIVYSEKEVQSDTGEEIPTLLNEIDKPGYDLYIVGQGSGKDMKIFSSLFEWCDHPELGVVGDILASTSFGSQSSVLIVQQYTVGRKTAVKQCHRKSKTGPEIL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01543 820 Gene3D - 35 440 IPR038770 -
Tsu01g01543 820 PANTHER CATION/H + ANTIPORTER 7 805 - -
Tsu01g01543 820 Pfam Sodium/hydrogen exchanger family 46 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu01g01543 820 PANTHER CATION/H(+) ANTIPORTER 21-RELATED 7 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01543 Tsu-Chr1 15077258 15080121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01543 11 798 Antiporter Super Family AT2G13620 38.000 8.51e-179 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01543 - - gmx:100792990 957.977