Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01511 atGGAAATTCTATCCGTTGTTGGAAAAGTAGCGGATCATACTGTTGTGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGCAATTTGAAGATGTTAGCGGATCATGTCAAAAACCTCCAGGCTGTAAGAGAAAGGACGATTCATTGggttgaagaagaaagaggaaatggtaaagaaattgaaacaaatGTGCTGAACTGGTTGGCGAAAGTGTACGAGGTCATTGAAAGGGCAAATCAGCTTCAAGAAGATTCTCGTCGTGCTAATGTAAGGTGCTCAACATGGGGTTTCCCCAATATGCTTTTGCGCTATCAACTAAGTAGGAAAGCAACAAAAATTGCAAACATTGTTATTCAAGATGAAGGAGAAGGGATGTTTGATCAAGTGACAAGAGACAGTGAAAAATATGAGACAAGAGAGTCACTTAAGAATGATATTGTGAAGGCTCTAGTTGATCTTAATTCATGCAACATTGGGGTCTATGGTCTGGGCGGGGTGGGTAAGACCACTCTGGTGAGAGAAGTGGCTATAATAGTAAAGAAACATAAATTGTTTGATAACGTGGTTATAACACATGTATCCCAAAATCCAGACTTAAAAACTATTCAAGGGGAGATTGCAGATTCGTTGGGTTTTCAATTTAGCGAGGAGACAATTTATAGAAGAGCAGCGCGCTTAAGACACAAAATCAAGATGGAGaaacatattcttgtcattCTAGATGATATATGGACCATGCTTGATTTGAAGACGGTAGGAATCCCAATTGGTAATGAACATAATGGTTGCAAATTATTGATGACATGTAGAAATCAAGATGTGTTGTTCCAAATGGATGTTCCAAAGGATCACACTTTCAAAGTTGAACTTATGAAGGAGAACGAGGCATGGAGCTTGTTTCAACTTATGGCTGGGGATGTTGTTAAAGATAGCAATTTGAAAGATGTAGCAATTCAAGTTGCCAAAAAATGTGAAGGTTTGCCTCTTATGGTAGTGACAGTAGCACGTGCAATGAGAAATAAGAGGGATGTCCAATCTTGGAAAGATACATTAAGGAAATTATTCATATCGCAAAGTAGTGATCATACAACTTATAATGCTTTGGAATTGAGTTACAACTCACTGGAGAGTGATGAAATGAGGGACATGTTCTTACTTTTTGCATTAATGCAAGGTAATGGTGTAGAGTACTTTCTGAAAATTGCAATGGGTTTGGAAATATTAAAGCATGTTACTACTGTGGATGACGCAAGGAACAGATTTTACACAATAATCAGATCTTTGGAGATGAGTTGTCTGTTGCTTGATGTTACAGTAGGTGGAGTGATCCAAATGCATGactttgtttgtgattttgctATATCCATAGCTCGTAGGGACAAACATTTATTTCTAAGCAAAAATCACCACGAGGAATGGCCATCCAAGGATTTTTTAGAAAGGTGCACACAAATTGCTCTACCATTTTATCAAGATGATGAGCTTCCTCAAACGATTTATTGTCCAAACATTAAGTTTTTCTATTTGTCGAGTGTGAACCGTTCTTTAGAAATTCCTAATACTTTTTTTGAGGGTATGAGAAGCCTTACCGCGCTAGACTTAACCCACTTGAACTTGTCTTCATTACCCACTTCATTTCAGCTCCTAACAAACCTTCAAACattgtgtttgaatttttgcATTTTGGACAATATTCAGGCAATAGAAGCTTTGCAAAATTTAACAATTCTCTGCATCTGCAAATCTTCAATGATCACGTTCCCAAGAGAAATAGGGAAATTGACTCAATTGAGAATGCTTGATTTGAGCAATTCAGGAATAGAAGTAGTCCCACCTAATATCTTATCAAACTTGATTAGATTAGAGGAGTTGTACATGGGCAATACCTCTATTAAATGGGAAGATGCGAATTTGATGACTCAAAATGAAAATGCTAGCATTGCTGAGCTTGGAAAACTACCAAACTTGATTGCCCTAGAATTACAAATTCGCGAGACTTGGATGTTGCCAAGGGACTTGCAATTGATGTTTGAGAAGCTGGAAAGATATAAAATAGTTGTTGGAGATGTATGGGAATGGTCTGAGGTTAAAaatgaaaccctaaaaacatTGATGCTCAAAGTTGGTACCAATATACATTTGGAGCACGGAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCAAAATGTGCTTTATCAACTAAATGGGGAAGGATTTCCATTGCTGAGACATCTCCATGTCCAAAATAATGCAAACATGAAGCACATTGTTGACTCTAACGAGAGAAATCGAATCTATGCGTCCTTTCCCAACTTGGAAACACTGGTACTTAATAATCTTAAAAACTTGGAGCATATATGCCGTGGTCCACTTTCAATTACTTCTTTTGGAAGCCTCAGTGTTATTAAAGTTAAAAATTGCATCAAGTTAAAATGTATTTTGTCCCTTACAATGATTAAAGCACTGTCTTGGCTCTCTGAGATTGATATTTGTGAGTGCAATTCTGTGAAGGAGATAGTGCTGGAAGACAACAAATTAAGTGCAAATAATGATATAACTAATGAAAAGATTGAGTTTCTTCAATTGCGTTCTTTGACTTTAGAACATTTGGAGACGCTTGATAATTTCTTCTTTCATCATTTGACGGATTCCAGAAGTAAACAAACATATCAAGGTTTAGAGTCTTATATTTCTTCAGCATTTTTCAATGCTCGGgtTGTATTTCCTAATTTGCATACCCTTAAATTGTGCTCACTCCccaatttgaataaaatttgggAAGACAATCATCATTCTATGTACAATTTGACCAACTTGACTGTGGATGATTGTGGTGGGTTGGAGTACTTATTCTCTTCTGCCGTTGTTGCAAGTTTTAAGAACCTCAAACAACTTAAAATAAGTAGTTGTCCTATGATGGAGGAGATAATAGCTAAGGAAGAGAGGGACAATGCATTGGAAGAGgttcattttttgaaattagaGACAATCATATTGCTTGACATGGACAACTTGAAGACAATATGGCACCGTCAATTTAAAACAGTGAAGATATTGGATGTTGcattttgtgaaaatattgtggtggtttttccttcttcaatgcaaaatacatataataagTTAGAGATGTTGAAGGTTGAATATTGTGTTTCTGTGGaagaaatatttgaattgactttCAATGAAAGTAGCATTGTAGAAGATACAACACAGTTGAAAGAAGTGGCTTTACTTTCGATGCCGAAGCTGAAAAAGATATGGAGTGGAGATCCTCAGGAAATTCTTAGTTTTCAAAATCTAATAAATGTAAAACTAGAATATTGTAAAGGTTTGGAGTATCTTTTACCACTTTCTGTAGCCACTCGTTGCTCACATCTCAAGGAACTTCATATAACTGAATGTGAAAACATCAAGGAAATTGTTGCAGAGGAGAAAGAATCTAGCGTGAATGTAGCTCCCATATTTGAGTTTAATCAACTGAGTACTTTACTCCTAAGGAACTTGGGTAAACTTGAGGGTTTATATGCTAAAGAGCATACCCTACTATGTCCATCATTGAAGACAATTGATGTTTTCAATTGTGCAAAGTTGGATTTGTATAGAACTCTATCTACAAGAAGCTCCAATTTTCTAGATGACCAACTTTCTGATCTAGCACATCAACCACTTTTCATTGCTGAAGAGGTGATTCCAAATTTGGAGATGTTGAGGATTGATAATAAGGAAGCTAACATGATACTGCAAGCCCATAACTCGAGTGTCCTATTCACAAAAATGACATATCTTGCTTTGTGTGCCTATAAGAATGAAGATACATTTCCTTATTTGTTTCTTCAAAATGCTGGTAGTCTTGAGTCACTAAGTGTTGAACAGAGTTGTTTCGAAAAGATATTCCAAGATGAAGGACAAATAAGTGAGAAGGCTCATACACGGCTCAAAAATCTGTATCTCATTAAATTACCTAAACTTCAACATATATGTGAGGAAGGATCTCAAATTGACCCAGTTCTTGAGGTCCTTCAAGTCTTATGGGTTACCAACTGTTCtagtttgataaatttattgCCTTCCTCTGCCATCCTTAGTCATCTAGAATATATGGATATAACCGATTGCAAAGgattaaaaagtttaattacATCTCCAACGATGCAAAGTTTGCACAAGCTCAGAAGACTGAAGGTAGAAAACTGTTGTTCACTTGAAGAAGTAATTACTGGAGAGGAAAACATTCAGATTACATTAATTAGTTTACAAAAGTTGGTGTTGAAATGGTTGCCTAGACTCAACCAATTTTGCTCTAAAAAGTGCTTCTTAAAGTTTCCATTGTTGGAGGTAGTAATTGTGAGAGATTGTCCTCGCATGAAGGTTTTTTCTGAGGGATACACAAGTACACCAAATCTTCAAAAAGTTCAAATTGTAGAAGATGGTGAAGAATGGTTTTGGAAGGGAAACATAAATGATACAATAACTAACATGTTTGAAGATAAGGAAGTCCTACGTTCTAATACACTGAATGAGACCATCATATCCTCGCATTTGCAAGATGATGAGTTAGGAAGCAAAGATGGTGTTGATTCAAATCTTGAGGAGTGA 4635 0.3465 MEILSVVGKVADHTVVPIGRQASYLIFYKGNLKMLADHVKNLQAVRERTIHWVEEERGNGKEIETNVLNWLAKVYEVIERANQLQEDSRRANVRCSTWGFPNMLLRYQLSRKATKIANIVIQDEGEGMFDQVTRDSEKYETRESLKNDIVKALVDLNSCNIGVYGLGGVGKTTLVREVAIIVKKHKLFDNVVITHVSQNPDLKTIQGEIADSLGFQFSEETIYRRAARLRHKIKMEKHILVILDDIWTMLDLKTVGIPIGNEHNGCKLLMTCRNQDVLFQMDVPKDHTFKVELMKENEAWSLFQLMAGDVVKDSNLKDVAIQVAKKCEGLPLMVVTVARAMRNKRDVQSWKDTLRKLFISQSSDHTTYNALELSYNSLESDEMRDMFLLFALMQGNGVEYFLKIAMGLEILKHVTTVDDARNRFYTIIRSLEMSCLLLDVTVGGVIQMHDFVCDFAISIARRDKHLFLSKNHHEEWPSKDFLERCTQIALPFYQDDELPQTIYCPNIKFFYLSSVNRSLEIPNTFFEGMRSLTALDLTHLNLSSLPTSFQLLTNLQTLCLNFCILDNIQAIEALQNLTILCICKSSMITFPREIGKLTQLRMLDLSNSGIEVVPPNILSNLIRLEELYMGNTSIKWEDANLMTQNENASIAELGKLPNLIALELQIRETWMLPRDLQLMFEKLERYKIVVGDVWEWSEVKNETLKTLMLKVGTNIHLEHGIKALIKGVENLYLDDVDGIQNVLYQLNGEGFPLLRHLHVQNNANMKHIVDSNERNRIYASFPNLETLVLNNLKNLEHICRGPLSITSFGSLSVIKVKNCIKLKCILSLTMIKALSWLSEIDICECNSVKEIVLEDNKLSANNDITNEKIEFLQLRSLTLEHLETLDNFFFHHLTDSRSKQTYQGLESYISSAFFNARVVFPNLHTLKLCSLPNLNKIWEDNHHSMYNLTNLTVDDCGGLEYLFSSAVVASFKNLKQLKISSCPMMEEIIAKEERDNALEEVHFLKLETIILLDMDNLKTIWHRQFKTVKILDVAFCENIVVVFPSSMQNTYNKLEMLKVEYCVSVEEIFELTFNESSIVEDTTQLKEVALLSMPKLKKIWSGDPQEILSFQNLINVKLEYCKGLEYLLPLSVATRCSHLKELHITECENIKEIVAEEKESSVNVAPIFEFNQLSTLLLRNLGKLEGLYAKEHTLLCPSLKTIDVFNCAKLDLYRTLSTRSSNFLDDQLSDLAHQPLFIAEEVIPNLEMLRIDNKEANMILQAHNSSVLFTKMTYLALCAYKNEDTFPYLFLQNAGSLESLSVEQSCFEKIFQDEGQISEKAHTRLKNLYLIKLPKLQHICEEGSQIDPVLEVLQVLWVTNCSSLINLLPSSAILSHLEYMDITDCKGLKSLITSPTMQSLHKLRRLKVENCCSLEEVITGEENIQITLISLQKLVLKWLPRLNQFCSKKCFLKFPLLEVVIVRDCPRMKVFSEGYTSTPNLQKVQIVEDGEEWFWKGNINDTITNMFEDKEVLRSNTLNETIISSHLQDDELGSKDGVDSNLEE 1544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01511 1544 SMART LRR_typ_2 597 620 IPR003591 -
Tsu01g01511 1544 SMART LRR_typ_2 529 551 IPR003591 -
Tsu01g01511 1544 Gene3D Ribonuclease Inhibitor 1238 1492 IPR032675 -
Tsu01g01511 1544 Gene3D Ribonuclease Inhibitor 583 852 IPR032675 -
Tsu01g01511 1544 Gene3D Ribonuclease Inhibitor 409 582 IPR032675 -
Tsu01g01511 1544 PANTHER RPP4C3 1341 1502 - -
Tsu01g01511 1544 PANTHER - 1109 1210 - -
Tsu01g01511 1544 PANTHER - 1341 1502 - -
Tsu01g01511 1544 PANTHER - 19 1089 - -
Tsu01g01511 1544 PANTHER RPP4C3 1109 1210 - -
Tsu01g01511 1544 PANTHER RPP4C3 19 1089 - -
Tsu01g01511 1544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 389 IPR027417 -
Tsu01g01511 1544 Pfam NB-ARC domain 143 363 IPR002182 GO:0043531
Tsu01g01511 1544 SUPERFAMILY RNI-like 1243 1485 - -
Tsu01g01511 1544 PRINTS Disease resistance protein signature 233 247 - -
Tsu01g01511 1544 PRINTS Disease resistance protein signature 327 341 - -
Tsu01g01511 1544 PRINTS Disease resistance protein signature 160 175 - -
Tsu01g01511 1544 PRINTS Disease resistance protein signature 595 611 - -
Tsu01g01511 1544 SUPERFAMILY RNI-like 1021 1210 - -
Tsu01g01511 1544 SUPERFAMILY L domain-like 447 1037 - -
Tsu01g01511 1544 Gene3D - 124 290 IPR027417 -
Tsu01g01511 1544 Gene3D - 294 379 IPR042197 -
Tsu01g01511 1544 Gene3D Ribonuclease Inhibitor 906 1233 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01511 Tsu-Chr1 14630278 14638555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01511 161 572 WRKY Transcription Factor Family AT5G45050 24.342 7.48e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01511 - - mtr:MTR_2g089975 2029.6