Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01505 ATGTTGCAAGATGTTATCCACCCTCCATCACATGATGATCAACTATCCATTGATGAAATTTCAAGTCCAAATATTAGTGCACAAATTTTTGAACTTTGTGACCCCGATTTGTTCCATGACACGCTACAACAAAATTCTGATGTTACTTCGAGCTCAAATTGTTGTCAAGAGgaaaacaacatcaacaacaacaacaacaacaataattcCTCGTATACCTTGAACAACATATCACAAGCTTTAGATTTAGAAAACAATAACATCACTAGCAATAACAATAGCAATAGTAATAGTACCGCTACAACAACGAGTACAACAAGTACTACCAACAcgaacaacatcaacaacaacaacattacgAATAATACCAATAATAACCTCTCAATCATCTTCGATTctcaagaagaaattgacaatgACATATCAGCTTCCATAGACTTCACATCATCGTCATCTTTTCTCGTTCCGTCCCTTCTTCCAATCAATACAACTCATCAAGAACAATTTGATTTCTCTTCAACACAACCTCATCATCTTGAACTATCAACATGTTCTGTTTTGAAAGGACTATCTTCTCAATATCAAACTGATATTAGTCCTGTTTCGGCACCAGGGCACCTTATCGGCAGTGCTTCGTTCCCTTCTGTGTTTGAAGATGATTGCATATCTTCAATTCCTTCTTATTCTCCTTCTTGTAATTCTTATCTTAGTAATGGTTTAGGTTTGTATATGCCTCAAGGAAATCTAAATACTGCTTTATCTGCTGATAGTTCCAGCTTATTTGGTGGAGGAATTCTATTAGGTTCTGATATGCAGACTCATGATTTGGATTATCAAGGTGAAAATGGTGGAATTTATTGTACTGATTCTGTTCAACAAGTTTTTAATCCTCAAGATTTTCAGgcacTTGGTACTGAGAATCACAAACTAATAGCTGGTGCTGGTTCTGCCAATTTGGCACCAGAAATCTCACACTTGGAGGACTCTAGTTTGAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAGAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCTTGTCGAAAAACTTTAGCGGATAGTCGACCGCGAGTTAGAGGAAGGTTTgcaaaaaatgatgaatttggaGAGAATCAAAGGCCAGCTAGTAGCAAccatgaagatgatgatgaaATAGCTGttaaagaagaagatgatatgGTTGATTCCTCAGATATCTTTGCACATATCAGTGGACTTAACTCCTTCAAATGCAACTATTCCATCCAATCCTtgatttga 1314 0.3234 MLQDVIHPPSHDDQLSIDEISSPNISAQIFELCDPDLFHDTLQQNSDVTSSSNCCQEENNINNNNNNNNSSYTLNNISQALDLENNNITSNNNSNSNSTATTTSTTSTTNTNNINNNNITNNTNNNLSIIFDSQEEIDNDISASIDFTSSSSFLVPSLLPINTTHQEQFDFSSTQPHHLELSTCSVLKGLSSQYQTDISPVSAPGHLIGSASFPSVFEDDCISSIPSYSPSCNSYLSNGLGLYMPQGNLNTALSADSSSLFGGGILLGSDMQTHDLDYQGENGGIYCTDSVQQVFNPQDFQALGTENHKLIAGAGSANLAPEISHLEDSSLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGENQRPASSNHEDDDEIAVKEEDDMVDSSDIFAHISGLNSFKCNYSIQSLI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01505 437 PANTHER CCT MOTIF FAMILY PROTEIN 17 437 - -
Tsu01g01505 437 MobiDBLite consensus disorder prediction 376 402 - -
Tsu01g01505 437 MobiDBLite consensus disorder prediction 86 123 - -
Tsu01g01505 437 Pfam CCT motif 341 383 IPR010402 GO:0005515
Tsu01g01505 437 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 437 - -
Tsu01g01505 437 ProSiteProfiles CCT domain profile. 341 383 IPR010402 GO:0005515
Tsu01g01505 437 MobiDBLite consensus disorder prediction 376 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01505 Tsu-Chr1 14559136 14563903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01505 320 383 C2C2-CO-like Transcription Factor Family AT5G24930 39.062 1.03e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu01g01505 CCT 5.8e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01505 - - gmx:100807304 498.819