Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01429 ATGACCAATGGCTTTAGTAACAATAGGCATGATATGCTAAACTCGGTTGCATGCAGATTATGCAACCGAGTTTTCATAAGCGGTCAAGCACTCATAACTCACATCGAATCTCACATGGAGCATGAAGAAGCCGCAATTAGAAGACTCTATCCTCAAGCACAATTTCCTTCTCATTATTTTCGACCGGGTTTTCATGTTCCAATTGACACTCAATACATCAATGGTGGTAGGATTTTCCATCCACAACCAAGAAGAAACCAATTTTGCAATGTTGGTTCTATGCAAATGCAACTTCCACCACATGTTTTGCCAAATCCACATGTTTACCAATGGAAGCATTTAGAAGAAGAATCTTCAAATGATGGTACTAAGGCATATATCATGCAACTTGAGAAACCTATCAAGAAGATTGATTTCATTGATTTGGTTAgtaatgatgatgatatgtcTAATGATGTTCATACATTGGATTTAGCACTTAAGCTCTAG 489 0.362 MTNGFSNNRHDMLNSVACRLCNRVFISGQALITHIESHMEHEEAAIRRLYPQAQFPSHYFRPGFHVPIDTQYINGGRIFHPQPRRNQFCNVGSMQMQLPPHVLPNPHVYQWKHLEEESSNDGTKAYIMQLEKPIKKIDFIDLVSNDDDMSNDVHTLDLALKL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01429 162 ProSiteProfiles Zinc finger C2H2 type domain profile. 16 43 IPR013087 -
Tsu01g01429 162 ProSitePatterns Zinc finger C2H2 type domain signature. 18 38 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tsu01g01429 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01429 - K09228 mtr:MTR_1g041455 255.373